Gallus gallus (chicken): 423404
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Entry
423404 CDS
T01006
Symbol
NRDE2
Name
(RefSeq) protein NRDE2 homolog isoform X1
KO
K26109
nuclear exosome regulator NRDE2
Organism
gga
Gallus gallus (chicken)
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gga03019
]
423404 (NRDE2)
Messenger RNA biogenesis [BR:
gga03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
423404 (NRDE2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NRDE-2
TPR_14
TPR_19
Motif
Other DBs
NCBI-GeneID:
423404
NCBI-ProteinID:
XP_015143230
CGNC:
8113
Ensembl:
ENSGALG00000010677
LinkDB
All DBs
Position
5:complement(44011552..44040441)
Genome browser
AA seq
1160 aa
AA seq
DB search
MALFPAFAGAPEPGEAPAGSSEGSRKELDWLSNPSFSTEDALLLHQRTTEAANLTPEKSP
LISRSTSRSDLSGESDTDESLKKSSKKRKKKKKKHHHYKTKKKAKGDSSSSESDLDTKCI
KDKAAANLDDKTSNLTSNRSVWLDDVQAFTTETFRIDKKSDPANWAYKSLYRGDIARYKR
RGESCLGLDTKKQCIAWDSPASEKKQLQRRPERYFSKSNVKTLNSDGIPVCNKSSPSDPA
AFIPVLHVETSDPSDTTEVNPLGIYDPSTTEWLQGKGYKGEEHEPVNTQQAFQEPGINVN
PILMTKVEEHNKKVRENPRDIQAWMNFVSFQDELMRGPSPYASMGEQEVRRKSLKLILEK
KLAILERAIESNPSNVDLKLARLSVCTEFWESPAVIKEWQKLIFIHPNNPELWKKYLLFC
QSQFSTFSVSKINSLYGKCLTTLAAVQDGSMVSHPPLPGTEEAMLAIFIQQCHFLRQAGH
SEKAVSLFQALIDFTFFKPDSVKDLPTKGQVEFFEPFWDSGEPRIGEKGARGWRAWMHQQ
EKGGWVAVDNPDDDDEEEIDEDEEIKDKTLPKWHIWMDIEYSRESRHWLPWRPDKTKNQA
EEDCEDPERQVLFDDLGPSLIQLSNPDIQHQLLYSFLQFLGVPCISRLFPPNLYIAMDEN
NIFDNVLSDEKPLTSIDTPLSGFNSIGHMDTMLRRRHHIGHCKDGEEFIQNVFHVLSPLF
SGKEKSNLSICWLQYEISKVVQCIQTKKKKKLKAQGRKSKKLAKNLLKAPDNRNNLALWK
LYAYLEWLLGNTDDARKVFDTALCTAGTGGLKSPQLCSLSLLYAQLEVELLQSLEGAVTS
RAVHILTKLAESGPYAPYNGQVLSVSVLKARKTYEHALQDYLNKAPVSDQDGASNSNQLV
NLVGCYTVFQYLTVGIDAAELVCTQALEKLEAPHPQKCENTAETSSIQHFPTALEAVTLL
RANLLRFHMKISVYPLNPLREALTEALKRFPSNQALWRAYIQSQRKSHSASKARRFFDGV
TRSTNSLEPWLFAIQAEQMRKKLTENVQRADVGEIYSTIPETGLTNRIISLFEHATQSEN
GTHCPLLWRMYLNFLVSVGKKERGKGLFYKAIQNCPWAKVLYMDAVEYFPEQLQETLDLM
TEKELRVRVPIEELDLLLEV
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggccttgttcccggctttcgccggtgccccagagcccggggaggccccagccggcagc
agcgagggctccaggaaagaattggactggcttagtaacccaagcttctctacggaagat
gccctgttactgcatcagcgcactacagaagctgcaaatctcacccctgaaaaatcacct
ctaataagtaggagtacttcaagatcagacttatcaggggaaagtgatacagatgagagt
ctgaaaaagtcaagtaagaaaaggaaaaagaaaaagaaaaagcatcaccactataagaca
aaaaagaaagccaagggggactccagtagcagcgaatcagacctggacacaaagtgcatc
aaggacaaagctgcagcaaatctagatgataaaacatcaaatcttaccagcaaccgctct
gtttggctggatgatgtccaggctttcacaacagaaactttcagaatagacaaaaaatca
gaccctgcaaactgggcctacaaatccctgtatcgaggggatattgcaagatacaaaagg
agaggagagtcctgtcttggcctagatacaaagaaacagtgtatagcttgggacagtcca
gcatcagaaaagaagcaattgcagaggcgacctgagcgttacttctcgaagagcaatgtg
aagaccctgaactcagatgggattcctgtttgcaataaaagttctccatctgacccagca
gcatttataccagttctccacgtggaaaccagtgatccttctgacacaacagaggtaaat
cctcttgggatttatgatccatcaactacagagtggctacaaggaaaagggtacaaaggt
gaagaacatgagcctgtaaatacgcagcaggcgtttcaagagcctgggataaatgttaac
cccattctaatgacgaaagtggaagaacataataagaaagtcagagaaaacccaagagat
attcaggcttggatgaatttcgtttcatttcaggatgaattaatgagaggacctagccct
tatgccagtatgggagagcaggaagtaagaagaaaatcactgaagttaatcttggagaag
aaactagctattttagagagggcaattgaaagcaatccaagtaacgttgatctgaaactc
gccaggctgagtgtttgcacggaattctgggaatcaccagctgtgatcaaagaatggcag
aagctaattttcatacatcccaacaatccagagctgtggaagaaatatctcctgttctgc
caaagtcaattcagtaccttttctgtttcaaaaattaatagcctctatggaaaatgtttg
actaccttggcagctgtacaggatggcagcatggtatcacatcctccgctgcctggcaca
gaagaagctatgcttgccatatttattcagcagtgccactttctgagacaagctggccat
tctgagaaggcggtgtcattgtttcaggctctgattgacttcaccttcttcaaacctgac
agcgtaaaagatctgccaacaaagggacaggtggaattctttgaacccttttgggacagt
ggagaaccacgaattggagaaaaaggagcaagaggctggagagcatggatgcaccaacaa
gaaaagggtggctgggttgctgttgacaatcctgatgatgatgatgaagaagagatagac
gaggatgaagagataaaggataaaactctccccaagtggcacatttggatggatattgaa
tattctcgtgaatcaagacattggttaccgtggaggccagacaaaaccaaaaatcaagca
gaagaagactgtgaagatccagaaagacaggtattatttgatgatcttgggccatcttta
atccagctttctaatccagacattcagcatcaattactgtactcatttttgcaattcctg
ggagttccatgtataagtagactctttcctcccaacctctatattgccatggatgaaaat
aatatctttgacaacgtgctttctgatgaaaagccactgacttctattgatacaccactt
tctggattcaacagtattggtcatatggacacgatgctaaggaggagacatcacataggc
cactgtaaagatggagaggagttcatacagaatgtttttcatgttctatcccccctgttt
tcaggaaaggaaaaatcaaacctgtccatttgttggttacagtatgaaatatcaaaggta
gttcagtgtatccaaacaaaaaagaagaagaagctgaaagctcaagggaggaaaagtaaa
aaattggccaagaatctccttaaagcacctgacaacagaaataaccttgctctctggaaa
ctctacgcctacctggaatggctgcttggtaacactgacgatgctaggaaggtgtttgac
acagccctttgcacagcagggacgggaggactgaagagcccccagctgtgcagccttagt
ctgctttatgctcagctggaagtggagctactgcaaagtctagaaggagctgttacctca
cgtgctgttcatatattgaccaaattggctgaaagtggaccatacgcaccctacaatgga
caagtgttatccgttagcgtcttgaaagctcgtaagacatacgagcatgcactgcaagac
tacttaaataaagcaccagtttctgatcaggacggggccagtaattctaatcagctggtt
aatttagttggctgttacacagtgttccagtatttgactgttggaattgatgctgcagaa
ttagtatgtacgcaggctttggaaaagcttgaagctcctcatccacagaaatgtgagaat
actgcagagacttccagcattcaacattttcccactgctcttgaggctgtcacactgctg
cgtgcaaatttactcagattccacatgaaaattagcgtttatcctttgaatcctttgcga
gaagcactaacagaggccctcaaacggtttcctagcaaccaggctctatggagagcatac
atccagagccagaggaagtctcacagtgctagcaaggcacgaaggtttttcgatggcgtc
acaaggtctactaactctttagagccatggctgtttgccatccaagcagagcagatgaga
aaaaaacttactgagaatgtccagagggcagatgttggtgaaatatattctactattcct
gaaactgggttgacaaataggattatctctctatttgaacatgcgactcagagtgaaaat
ggtacccactgtccattgctgtggagaatgtatttaaactttctggtttcagtcggaaaa
aaggaaagaggtaaaggattgttttacaaagccattcagaactgtccttgggcaaaggta
ctctacatggacgcagtggagtacttccctgagcagctgcaggagacacttgatctcatg
actgaaaaagaattaagagtgcgggtaccaattgaagagctggatctgctcttagaggtt
taa
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