Gavialis gangeticus (Gharial): 109289951
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Entry
109289951 CDS
T07453
Symbol
DDX46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109289951 (DDX46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ggn03041
]
109289951 (DDX46)
Enzymes [BR:
ggn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109289951 (DDX46)
Spliceosome [BR:
ggn03041
]
Complex A
U2 snRNP components
U2 related factors
109289951 (DDX46)
Complex B
109289951 (DDX46)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
109289951
NCBI-ProteinID:
XP_019361816
LinkDB
All DBs
Position
Unknown
AA seq
1038 aa
AA seq
DB search
MGRESRHYRKRSASRGRSGSRSRSRSPSDKRAKRGEDRRSRSRDRERRRERSRSRDKRRS
RSRERKRPRRSRSRERERSRERRRTRSRDRRRSRSRSRGRRSRSPSPGKNKKTENRSRSK
EKTEGVEVTKEKKKEKEDKEEEKDKEVNNFDQNKLEEEMRKRKERVEKWREEQRKKAMEN
IGELKKEIEEMKQGKKWSLEDDDDDEEETAEGEKEGMEVEDEELDPLDAYMEEVKEEVKK
FNMRSVKGGGGSEKKSGPTVTKVVTVVTTKKAAVESEKKKGELMENDQDAMEYSSEEEEV
DLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMTPEEVNVYRLEMEGIT
VKGKGCPKPIKTWVQCGISMKILNSLKKHGYEKPTPIQAQAIPAIMNGRDLIGIAKTGSG
KTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYG
GTGISEQIAELKRGAEIIVCTPGRMIDMLAANNGRVTNLRRVTYVVLDEADRMFDMGFEP
QVMRIVDNIRPDRQTVMFSATFPRAMEALARRILNKPIEVQVGGRSVVCSDVEQHVIVIE
EENKFLKLLELLGHYQEKGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSI
INDFKNGACKLLVATSVAARGLDVKQLMLVVNYSCPNHYEDYVHRAGRTGRAGNKGFAYT
FITEDQARYAGDIIKALELSGNPVPAELEKLWADFKDQQKAEGKIIKKSSGFSGKGFKFD
ETEQALANERKKLQKAALGLQDSDDEDTAVDIDEQIESMFNSKKRVKDMAAPGTSNAPTP
TAGNAEKLEIAKRLALRINAQKNLGAEAQVFVPFHFKDVMQQATNAILRGGTIQAPTVSA
KTIAEQLAEKINAKLNYVPIEKQEEEKQEGGQNESFKRYEEELEINDFPQTARWKVTSKE
ALQRISEYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEITRLIKEEL
IRLQNSYQPTNKGRYKVL
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgcgagtccaggcactatcggaagcgctccgcttcacggggacgttctggcagc
cgctccagaagtcgttctccatccgacaaaagagcaaaacgcggagaagacagacgttct
agaagcagagatcgagaacgtcggcgtgagaggtcacgcagcagggacaagaggagatca
aggtcacgggagaggaagcgcccaagacggtccagaagcagagagcgagaacggagcaga
gagaggagaagaacacggagtcgggataggagacgatccagaagcagaagtagaggtaga
cggtcccgatcccccagtcctggcaagaacaagaaaacagaaaacagatcaagatctaaa
gaaaagacagaaggtgtagaagttaccaaggaaaagaaaaaagagaaagaggacaaagaa
gaagaaaaggataaagaggttaataactttgatcagaacaaactggaggaggaaatgaga
aaacgaaaagagagagtagagaaatggagggaagaacagcgcaagaaggctatggaaaac
ataggagaattgaaaaaagaaattgaagaaatgaaacaggggaaaaaatggagcttagaa
gatgatgatgatgatgaggaggaaacggcagaaggagaaaaagaaggcatggaggtggaa
gatgaagaattagaccctctagatgcttacatggaagaagttaaagaagaagtcaaaaag
ttcaatatgagaagtgtgaagggtggaggtgggagcgaaaagaaatctggaccaactgtt
accaaagtagtgactgtggtgacaaccaaaaaggcagctgtagaatcagaaaagaagaaa
ggggagctgatggagaatgaccaagatgcaatggagtattcttcagaagaggaagaagtt
gatcttcagactgccttgacgggctatcagaccaaacagaggaagctgctagaaccagtg
gatcatggaaagatagagtatgagcccttcaggaaaaatttctacgttgaagttccagag
cttgctaaaatgaccccagaagaggtgaatgtgtacaggctggaaatggagggaattaca
gtcaaggggaaaggctgccccaaaccaatcaaaacctgggtacaatgtggtatttctatg
aaaattctcaattccctcaaaaaacatggctatgaaaagcccacgcccatccaagcccag
gctattccagcaattatgaatggacgtgacctgattggcattgctaaaacaggaagtgga
aagaccattgcatttcttttgcctatgttcaggcatattatggatcagaggtcgttagaa
gaaggagaaggtccaatagctgttatcatgaccccgactcgagagttggctttgcaaatt
accaaggagtgtaagaagttctcaaagactctgggacttagagttgtgtgtgtctatgga
ggaacaggaatcagtgagcagatagcagaactgaaaagaggtgctgaaattattgtttgc
acacctggacgtatgattgacatgttagcagctaacaatggacgggtgacaaaccttcgc
agggttacatacgttgtacttgatgaagcggacagaatgtttgacatgggttttgaacca
caggtcatgcgcattgtagacaacatcaggcctgatcgtcagacggtcatgttctctgct
actttccccagagccatggaggctttagctcgtcgaattctgaataaacctattgaggtt
caagttgggggaagaagcgtggtctgttctgatgtggagcaacatgtaattgttatagaa
gaagagaacaaattcttgaagttacttgaactgctgggacattatcaggagaaaggatct
gttatcatatttgttgataaacaggaacatgctgatgggttgttgaaagatttaatgaga
gcttcttatccctgcatgtcacttcatggaggaattgatcagtatgacagagacagcata
attaatgattttaagaatggagcgtgcaaacttcttgtggccacatcagtagcagcaaga
ggcctggatgtaaagcagctgatgctggtagtcaattacagttgtcccaaccattatgag
gattatgtacacagagcaggccgaactggacgagccggcaataaaggatttgcatacact
tttattacggaagatcaagcacggtatgctggcgatatcattaaggctttggaattgtca
gggaatccagttcctgctgaactggagaagctctgggctgacttcaaagatcagcagaaa
gctgaagggaagattatcaaaaagagtagtggcttctctggcaaaggatttaagttcgat
gaaacagaacaggctttggcgaatgaacgcaagaaactacaaaaagctgctcttggcttg
caggattcagatgatgaagatacagctgttgatattgacgaacaaattgagagcatgttc
aattcaaagaagagagtgaaagacatggcagcaccaggaacatctaatgctcctactccc
acagctggtaacgcagaaaaactggaaattgccaaaagattggcattgagaatcaatgcc
cagaagaatcttggtgcagaggcacaagtgtttgtccctttccacttcaaggatgtgatg
cagcaggcaacaaacgctatcttgagaggaggcacaattcaggctcctactgtatctgcc
aaaaccattgcagagcagctggctgaaaagatcaatgctaagctcaattatgtacctata
gagaaacaggaggaagagaaacaggagggaggacaaaatgaatcctttaagagatatgag
gaggaactggagatcaatgacttcccacagactgccaggtggaaagttacatctaaggaa
gctctgcagagaatcagtgaatattctgaagctgctattacaatcagaggaacatatttc
cctccaggcaaagagcctaaagaaggcgaacgaaaaatttatttggctatagagagtgcc
aacgagctggctgtgcagaaagcaaaggctgaaatcacgagacttataaaggaagaacta
atcagattacaaaattcataccaaccaaccaacaaaggaagatacaaagttttataa
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integrated database retrieval system
