Gavialis gangeticus (Gharial): 109293066
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Entry
109293066 CDS
T07453
Symbol
RC3H2
Name
(RefSeq) roquin-2 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
ggn
Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ggn03000
]
109293066 (RC3H2)
04121 Ubiquitin system [BR:
ggn04121
]
109293066 (RC3H2)
Transcription factors [BR:
ggn03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
109293066 (RC3H2)
Ubiquitin system [BR:
ggn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109293066 (RC3H2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_UBOX
zf-RING_2
zf-CCCH_4
zf-C3HC4_3
Prok-RING_4
zf-C3HC4
zf_CCCH_4
zf-C3HC4_4
zf-C3HC4_2
Xin
Motif
Other DBs
NCBI-GeneID:
109293066
NCBI-ProteinID:
XP_019366406
LinkDB
All DBs
Position
Unknown
AA seq
1191 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTD
IDVLPVNFALLQLVGAQVPDHQTVKLSNLGENKHYEVAKKCVEDLALYLKPLSGGKGVAS
LNQSALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANI
DPNPDATSPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHEAPQPQPNSKYKTSMCRDLR
QQGGCPRGTNCTFAHSQEELEKYRLRNKKISATVRTFPLLNKVGVNSTVSTTTGNVISVI
GSPETTGKMVPSTNGIASLESGVPQLIPRCADTSLRSLENVKKGGKSGANGHNVSGSPTE
SLSENKIGSPPKTPVSQAAATSAGPPNIGTEMNSVPPKSSPFVPRVPVYPAHSDNVQYFQ
DPRAQMSYEVPQYPQTGYYAPPPTVPAGVAPCVPRFVRSNNVPESSLPPASVPYADHYST
FPPRDRLNSPYQPPPPQPYGPVPPVPSGMYAPVYDSRRIWRPQMYPRDDIIRSNSLPPMD
VMHSSVYQTSLRERYNSLDGYYSVACQPPNEQRTVPLPREPCGHLKTSYDDQLRRKPEQW
AQYHTQKTPLVSSTLPMAATSPTPPSPLFNVDFSTEFSESVTDLSGTKFEEDHLSHYSPW
SCGTIGSCINAIDSEPKDVIANSNTVLMDLDSGDVKRRVHLFETQRRAKEEDPIIPFSDG
PIISKWGAISRSSRTGYHTTDPIQATASQGSATKPISVSDYVPYVNAVDSRWSSYGSDST
SSARYIERDRFIVTDLSGHRKHSSTGDLLSIELQQAKSNSLLLQREANALAMQQKWSSLD
EGSRLTLNLLSKEIDLRNGESDYTEDGADTKPDRDIELELSALDTDEPDGQGEQIEEILD
IQLGISSQEDQLLNGTTVENGHSLKQRQKEPLEQKRQSLGEDLVILEEQKAILPVTSCFS
QPITASVSSASCLPISTSVSVGSLILKTAHIMSEDKNNFLKPAVNGKMVNS
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgcaggcagctcagtggacagagtttctgtcctgtccaatctgctacaacgag
tttgatgagaatgtgcacaaacccatcagtttaggttgctcccacactgtctgtaagacc
tgcctgaacaagcttcatcgcaaggcatgtcctttcgaccagactgccatcaatacagac
atcgatgtgcttcctgtaaactttgcacttcttcaattagttggagcccaggtaccagat
catcagacagtaaagttaagtaacctaggagagaacaaacattatgaggtagcaaagaag
tgcgttgaggatttggcactatacctgaaaccactaagtggaggaaagggtgttgctagt
ttgaatcagagtgcactgagccgtccaatgcaaagaaagctggtgacgctggtaaattgt
cagctggtggaggaggagggtcgggttagagctatgcgtgcagctcgttcacttggagaa
agaactgtaaccgaattgattttgcagcaccaaaatcctcagcagctgtctgccaatctt
tgggctgctgtcagagcacgaggatgccagttcctagggccagctatgcaagaagaagct
ttgaaacttgtattactggcactggaagatggctctgcactctcaagaaaagttttagta
ctttttgttgtgcaaagactggaaccaagatttcctcaggcatctaaaacgagcattggt
catgttgtgcagctactgtatcgagcatcatgctttaaggtcacaaaaagggatgaagat
tcttctctgatgcagctgaaagaggaatttcggagttatgaggctttgcggagagagcat
gacgcccaaattgttcacattgccatggaagcaggccttcgaatatcaccagaacagtgg
tcttcccttctttatggtgacttagcacataagtcacacatgcagtccattattgataag
cttcaatcgccagagtcatttgcaaagagtgtacaggagttgacaattgtcttgcaacgt
acaggtgatccagcaaacttaaacagactgaggcctcacttagagcttctagcaaacata
gatcctaatccagatgcaacgtctccaacatgggagcagctggagaatgcaatggtggct
gtgaagactgtagtacatgggctggtggactttattcagaactatagtagaaaagggcat
gaagcaccacagccacaaccaaacagcaaatataaaacaagtatgtgccgagatctgcga
cagcaagggggatgtccacgaggaactaactgtacatttgctcactctcaggaagagctt
gaaaagtatcgtttaaggaacaaaaaaatcagtgcaacagtgagaaccttccctcttcta
aacaaagttggcgtaaacagcactgtttcaaccacaacaggaaatgtaatctctgtcata
ggaagccctgaaacaacagggaagatggtgccaagtactaatgggattgcaagtctggaa
agtggtgttccccaattgattccccgctgtgctgacacttccttaagatctttggagaat
gtcaagaaaggggggaaatctggagccaatggtcacaacgtctctggatcccctacagaa
tcattatctgaaaataaaattggctctccacccaagactcctgtaagccaggcagcagct
acctcagctggtcctcctaatattggaacagagatgaattctgtgcctccaaaatccagc
ccatttgtacccagagtaccggtctatcctgcacattctgataatgttcagtattttcaa
gatccacgtgcccagatgtcctatgaagttccgcagtacccacagacgggatactacgca
ccacctccaacagtaccagctggtgtggctccctgtgttcctcgctttgtgaggtccaat
aacgttccagaatcctccctcccacctgcttccgtgccatatgccgatcattacagtaca
tttccccctcgagatcgactgaattctccttaccaacctcctcctccgcagccgtatgga
ccagttcctcctgtcccttctggaatgtatgccccagtgtatgacagcaggcgtatctgg
cgtccacagatgtacccaagagatgatattattaggagcaattctttacctccgatggat
gtgatgcactcatctgtttatcagacatcattgcgtgagagatataactctttggatggg
tattactctgtggcttgccaacctccaaatgagcaaaggactgtgcctttaccaagggag
ccttgtggtcacttgaagaccagttatgatgatcagttacgacgaaagccagagcaatgg
gcacaataccacacacagaaaacccctcttgtatcatcaacgcttcctatggcagcaaca
tctccaacaccaccttctcctctcttcaatgtggacttcagcacagagttttcagagagt
gttactgacttgagtggtactaaatttgaagaagaccatctttcccactactcaccctgg
tcctgtggcactattggctcctgcataaatgctatcgattcagagcccaaggatgtaatc
gccaattcaaatactgtgttaatggatttggacagtggagatgttaaaaggagagtgcat
ttgtttgaaactcaaagaagggcaaaagaagaagatcccatcattccctttagcgatgga
ccgatcatctccaagtggggtgcaatctccagatcatctcgcacaggttatcacacaaca
gaccctattcaagccactgcttcccaaggaagtgctactaagcccataagtgtatcagat
tatgtcccatatgtcaatgctgttgattcaagatggagttcttatggctcagattccact
tcatcagcgcgctatatagaacgggataggttcatagtgacagatttatctggtcacaga
aagcattccagcactggagatttactgagtattgaactacagcaggccaaaagtaattca
ttgttacttcagagggaggctaatgcgctagccatgcaacagaagtggagttctctagat
gaaggcagtcgccttaccttaaatcttttaagcaaggaaattgatttgaggaatggtgag
agtgactatactgaagacggtgcagatacaaagccagatcgagacattgaattagagctt
tcagcccttgatactgacgaacctgatggacagggtgaacaaatagaggagatcctggac
atacagctaggtatcagttcacaagaggatcagctgctcaatgggacaactgtagagaac
ggtcattcactaaagcagcgccaaaaggaacctttggagcagaagagacaaagtttaggt
gaagaccttgtgattctggaggagcagaaagcaatcctgcccgtaacttcttgcttcagt
cagcccatcacagcatctgttagcagtgcaagctgcctgcccatcagcacatcagtcagt
gttggcagcctcattttgaaaactgctcacattatgtctgaggataaaaacaacttttta
aagccagctgtgaatggcaagatggttaacagctga
DBGET
integrated database retrieval system
