Gavialis gangeticus (Gharial): 109295230
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Entry
109295230 CDS
T07453
Symbol
NFASC
Name
(RefSeq) neurofascin isoform X1
KO
K06757
neurofascin
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn04514
Cell adhesion molecule (CAM) interaction
ggn04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
109295230 (NFASC)
04517 IgSF CAM signaling
109295230 (NFASC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ggn04515
]
109295230 (NFASC)
Cell adhesion molecules [BR:
ggn04515
]
Immunoglobulin superfamily
L1 family
109295230 (NFASC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
Bravo_FIGEY
Ig_VEGFR-1-like_5th
V-set
C2-set_2
FN3_DSCAM-DSCAML_C
Ig_5
Ig_PDGFR_d4
BiPBP_C
Motif
Other DBs
NCBI-GeneID:
109295230
NCBI-ProteinID:
XP_019369488
LinkDB
All DBs
Position
Unknown
AA seq
1352 aa
AA seq
DB search
MVRQRYLLTCTGVVFAVCLHHIIRAIEVPLDRNIQEELSQPPTIIKQSVKDYIVDPRDNI
FIECEAKGNPIPTFSWTRNGKFFNVAKDPKVSMQYRSGTLVIDIHSRGRPEDYEGEYQCF
ARNDYGTALSNKIHLQVSKSPLWPKEKVDVIEVDEGAPLSLQCNPPPGLPPPVIFWMSSS
MEPIHQDKRVSQGQNGDLYFSNVMLQDAQTDYSCNARFHFTHTIQQKNPYSLKVKTKNPH
NETSFRNHTDMYSARGVTETTPSFMYPYGTSSSQMVLRGVDLLLECIASGVPAPDIMWYK
KGGLLPAGKSKFENFNKALRISNVSEEDSGEYFCLASNKVGLIRHTISVRVKAAPYWLDE
PQNLILAPGEDGRLVCRANGNPKPTIQWLMNGEPIESSSPNLSREVAGDTIVFRDTQIGS
SAVYQCNASNEHGYLLANAFVSVLDVPPRILAPRNQLIKVILYNRTRLDCPFFGSPIPTL
RWFKNGQGSTLDGGNYQVHENGTLEMNMARKEDQGIYTCVATNILGKAENQVRLEVKDPT
RIVRGPEDQVVKKGSMVRLDCRIKHDSTLKLTVSWLKDNTGLHIGKGMKKEDDGLTIHGV
AEKDQGDYTCIASTELDKDSAKAHLTVLAIPSVPTNRMTALPKGRPNQPRDLELTDLAER
SVRLTWIPGDDNNSPITDYIVQFEEDRFQAGTWYNHSSYPGSVNSAVLRLSPYVNYQFRV
IAVNDVGSSLPSLPSERYQTNGARPEINPTGIQGVGTQKNNMEITWTPLNATQMYGPNLR
YIVKWRRRDTRESWSNATVRNTRYVVWNTPIYVPYDIKVQAENDFGRAPEPEVVIGYSGE
DYPKAAPTDIRLRVLNSTAVSLQWTKVYPDTVQGQLKEYRAYYWRESSLLKNLWVSRKRQ
YTSFLGDRPRGTVSQLFPYSNYKLEMVVVNGRGDGPRSEIKEFTTPEGVPSIPRYLRIGQ
PNMETITLEWDHPEHPNGILTGYNLRYQAFNGSKVGKTVGENFSPNQTRFTLQRTDPISR
YRFFLRARTQVGDGAVLMKESPALLNEATPTPAATWLPPTTVDLTSPTTTTTLATTTTTT
TATTAATTTTTTTVASTTTTTESAPPATTKQEFAANGSSIWNVTASANSNWANITWSHNF
SAGTHFVVEYMDRNNTVRSVAVKAQTPSSVQLADLIPGMEYKLWVFPKLSGPKENSYITF
TTSSAYTKNHADIATQGWFIGLMCAIALLVLILLIVCFIKRSRGGKYPVRDNKEEHLNPE
DKNVEDGSFDYRSLESDEDNKPLPNSQTSLDGTIKQQESDDSLVDYGEGGEGQFNEDGSF
IGQYTVKKDKEETEGNESSEATSPVNAIYSLA
NT seq
4059 nt
NT seq
+upstream
nt +downstream
nt
atggtaaggcaaaggtacctcctcacctgcacaggagttgtgtttgctgtctgcctgcat
cacatcatcagagccatcgaggtccctctggatcgaaatattcaggaagaattgtctcag
ccccccacaattataaagcagtctgtgaaggactatatagtagacccaagggataatatc
ttcattgaatgcgaagctaaagggaaccccattcccaccttttcgtggacccggaatggg
aagttcttcaatgtggcgaaggacccaaaagtatcaatgcaataccggtcagggacgctg
gtgatcgacatccacagcagggggaggccagaggactatgagggggaataccagtgcttt
gcccgcaacgactatgggacagcgctctcaaacaaaatccacctgcaggtttctaagtct
cccttgtggccaaaggaaaaagtggacgtgatcgaggtggatgaaggagctccccttagt
ctgcagtgcaacccaccccctgggctgcctcctcccgtcatcttctggatgagcagctcc
atggagcccatccaccaagacaagcgcgtctcccagggccagaacggtgacttgtacttc
tccaacgttatgttgcaggatgcgcagaccgactacagctgtaacgcacgcttccacttc
acccataccatccagcagaaaaacccctactccctcaaggtcaaaaccaagaatccccat
aatgaaacgtcttttcgaaatcacactgacatgtacagtgcccgaggggtcacagaaaca
acccccagcttcatgtatccctacgggacctcaagtagccagatggtactcagaggtgtg
gacctcctgctggagtgcattgcttcgggagtaccagcaccagacatcatgtggtacaag
aaaggaggattgctcccagctggcaaaagcaagtttgaaaactttaacaaggcccttcgc
atctccaatgtctccgaggaagactccggggaatatttctgcttagcctccaacaaagtg
ggcctcatccgccacacgatctcagtgagagtgaaggctgccccttattggttggatgaa
ccacaaaaccttattttggctcctggagaggatgggagactggtgtgtcgtgcaaatgga
aaccctaaacctacaatccagtggctgatgaatggagaacccatagagagctcgtctccc
aacctaagccgcgaggtggccggagacaccattgtgtttcgagacactcagattggcagt
agtgccgtgtaccagtgtaatgcttccaacgaacatggataccttttggccaatgccttt
gtcagcgtgctagatgtgcctccccggatccttgccccgcgaaaccagctgatcaaagtg
atcctgtacaaccggacccgccttgactgcccgttcttcggctcccccatccccacgctg
cgctggtttaagaatggccagggcagtactctggatggaggcaactaccaggtgcacgaa
aacgggactctggagatgaacatggcacggaaggaggatcagggaatctacacctgtgtg
gccaccaacattttgggtaaagccgagaaccaggttcgtttggaggtcaaagacccaact
aggatcgtgagagggcctgaagatcaggtggtgaagaagggctccatggttcgcttagac
tgccggataaagcatgactctacactgaaactcacggtcagctggttgaaggacaatacc
ggtctgcatattggcaaggggatgaagaaggaagatgatggtctgacgatacacggcgtg
gctgagaaggatcaaggagattatacctgcatagccagtactgaactggacaaggactct
gccaaagcgcatctcacggtgctagctattccatccgttccaactaatcgtatgacagcc
ttacccaaaggacgacccaaccaaccccgcgacttggagctgacagacctggccgaaagg
agcgtgcggctgacttggatacctggcgatgacaacaacagcccgatcacagactacatc
gttcagtttgaggaagaccggttccaggctgggacgtggtacaaccactccagttaccca
gggagcgtgaactcggctgtgctgcgtctctcgccgtacgtcaactatcagttccgagtg
attgccgtgaacgacgtggggagcagcctgcccagcctcccctccgagcggtaccagacc
aacggggcgcgtccagaaattaacccaacaggcattcagggagtagggacacaaaaaaac
aacatggaaataacttggacaccactgaatgcaacccaaatgtatggacccaacctcagg
tacatagtaaaatggagaaggagggacacgcgagaaagttggagtaatgcaactgtgaga
aacacgaggtatgtcgtctggaacacgcccatctacgtgccctacgacatcaaggtgcaa
gcagagaacgactttgggagagcaccagagcctgaagtcgtcatcggctactcaggggaa
gattatcccaaggctgcccccactgatattaggctaagagtcctgaacagcactgcagta
agtctccagtggacgaaagtgtacccggataccgtccaaggacaacttaaggaatacaga
gcctattactggagagaaagtagtttgctgaagaacctgtgggtctccagaaaaaggcag
tacacaagttttcttggagaccgaccacggggtacagtgtcccagctgtttccttatagc
aactacaaactggagatggttgtagtcaatgggagaggagatgggccccggagtgaaatc
aaggagttcacaacacctgaaggagtgcccagcatcccacggtacttaagaattggacag
cctaacatggaaaccatcactttggaatgggaccaccctgagcatcccaatggcatcctc
actggatacaaccttagataccaagcctttaatggatccaaagtgggcaagacagtggga
gagaacttctcccccaatcaaacaaggttcacgctccaaaggacagaccccatctcacgc
tacagattcttcctgcgtgccaggacccaggtgggagatggagcagtcctcatgaaggaa
tcgccagccctgctgaatgaagccactccaaccccagctgcaacctggttgcctccaact
acagtcgatctaaccagccctacaaccaccaccaccctcgccacaactactaccaccacc
actgcaaccacagctgccacaaccactacaaccaccaccgtcgccagcactacaaccact
acggagagtgctccgccagccaccactaagcaggagtttgccgccaatggatcgtccata
tggaacgtaacggcttcggctaacagtaactgggcaaacatcacatggagccacaatttt
tccgcaggaactcactttgtggtcgagtatatggaccgtaacaatacagtgcgctctgtc
gctgttaaagcccagaccccttcctctgtgcagctggccgacctgattcctgggatggag
tacaagttgtgggtatttcccaaattgtctggccccaaagaaaactcttacataaccttt
acgaccagctcagcttataccaagaaccacgcggacattgcaacgcagggctggttcatt
gggctgatgtgtgccattgcccttctggttctgattttgttgatagtgtgctttattaag
agaagcagaggcgggaaatatccagtgcgggataacaaagaagagcatctaaatcctgag
gacaagaacgtagaggacgggtcgtttgactacaggtctcttgaaagtgatgaagacaac
aagccgctgcccaacagccagacctccctggatggcacaataaagcagcaggagagcgat
gatagcttggtggactatggagaggggggcgaagggcagttcaacgaggacggctccttt
atcggccagtacacagtcaagaaggacaaagaggagacagaaggcaacgagagttcagaa
gccacgtccccagtcaatgctatctactcgctggcatag
DBGET
integrated database retrieval system
