Gavialis gangeticus (Gharial): 109298532
Help
Entry
109298532 CDS
T07453
Symbol
NRDE2
Name
(RefSeq) protein NRDE2 homolog
KO
K26109
nuclear exosome regulator NRDE2
Organism
ggn
Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ggn03019
]
109298532 (NRDE2)
Messenger RNA biogenesis [BR:
ggn03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
109298532 (NRDE2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NRDE-2
TPR_14
TPR_19
Motif
Other DBs
NCBI-GeneID:
109298532
NCBI-ProteinID:
XP_019374210
LinkDB
All DBs
Position
Unknown
AA seq
1172 aa
AA seq
DB search
MALFPAFAGAGAAAAVAGDEGSRRELNWLSNPSFSTEDALKLHQRSIEDTNLTPERSPLI
RSVSRSELSGGSNTNEGLKKTTRKKKEKKKKHHHHKKVKKKTREESSYSESDSDAEYGKD
RPVGSDRNCEREASSLNLEGTALSNVQNSHFVWLDDIQALTAETFRVDKKRDPANWEYKS
LYRGDIARYKRKGDSCLGVDLKKQCITWDNSTAKKKQSQKQPNRYFSKSSLQLLSTDGIP
VHSKSQTSPSSPSSFIPVLQLESDVPSAPSGVNPLGIYDPMTTLWLQGKGPSDNDALQQQ
ASQGTKDNVNSILMAKVEEYNKKVRENPRDVHAWMEFVSFQXXXMRGSSPYSVSEGEQEV
RRKSLKLILEKKLAILERAIESNPNVVDLKLAKLKLCTEFWEPSTLIREWQKLVFLHPNN
PGLWQKYLLFCQSQFSTFSVSKVHGLYGKCLSTLAAVQDGSMVSHPILPGTEEAMLAIFL
QQCHFLRQAGHSEKAVSLFQALIDFTFFKPDSVKDLPTRGQVEFFEPFWDSGEPRIGEKG
AKGWKAWMHQQEKGGWIVVSKPDDDDDEEDIDEDQEIKDKTLPKWEIWLDVEGSREARHW
VPWRPDKTKKQTEEDCEDPERQVLSDDLGPSLIKLSNPDLQIQLLYSFLQFLGVPCGCSL
FPSSLYVAMDENNIFDSGRLDERPLTSFYSSFAGVSSIGHMDTMIRRRQHIGHCKEGEEF
IQNLFHVILPLFSGKEKINLSECWLLYEISKIIQCLQAKNKKKLKIQGKKSKRLAKNLLK
ASENRNNLSLWKLYAYLEWLLGNTDDARKVFDAALCMARTEGMRDSQLCNLSLLYAQLEV
ELLESLEGMAMSRAVHILTKLVESGPYVPYSGQALSVNILKARKIYEHALQDYLSITPIS
SQGQANSCSQMVSLVGCYALFQYLTVGIDAAVLIYKQISEKLKGLGLQKCERVGENLGIQ
NFATPLEAVTMMHTNLLQYHMKISVYPLNPLREVLTEALKLYPSNQALWRSYIQIQRKSH
NASKARRFFHAVTRSTESLEPWLFAIQAEEMRKKLVENVQRANIGEIYSTIPETGLTNRI
IALFDHAVQSENGAHCPLLWRMYLNFLVSLGNKERSKGVFYKAIQNCPWAKVLYMDAVEY
LSDQLQEMLDLMIEKELRVRVPIEELELLLEV
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttttcccggcgttcgccggggccggggccgcggccgcggtagctggcgacgag
ggctctaggcgagaattgaactggcttagtaatccaagcttctctaccgaagatgcactt
aaactgcatcagcgctccatagaggatacaaatttaaccccagagagatcaccactcata
agaagtgtttcaagatcagagctgtcaggaggaagtaatacaaatgaaggtctaaaaaaa
actactaggaagaaaaaagagaaaaagaaaaagcatcatcatcacaaaaaagtaaaaaag
aaaaccagagaggaatcaagttacagtgagtcggactcagatgctgaatatgggaaagac
agacctgtaggaagtgacagaaactgtgaaagagaagcatcgtcattgaatctagaaggc
acagcgttatcaaatgttcaaaacagccacttcgtttggctggatgatatccaggcattg
acagcagaaaccttcagagtagacaagaaacgagatcctgcaaattgggaatacaagtca
ctatatcgaggggacatagccaggtataaaaggaaaggtgattcctgccttggtgttgac
ctaaagaagcaatgcataacttgggataattcgacagcaaaaaagaagcaatcccagaaa
caacctaatcgctacttttcaaagagtagcttgcagttgttgagcacagatggcattcct
gttcacagtaaaagccaaacttccccatctagcccaagttcttttataccagttttacaa
ctggagagtgatgtgccttcagctccatctggagtaaatcctcttggtatttatgatcca
atgactacactgtggctacaaggcaaaggtccctcagataatgatgctttacagcagcag
gcatcccaagggaccaaagacaacgttaattcaattttaatggcaaaagtggaagaatat
aacaagaaggtcagagagaacccaagagatgttcatgcttggatggaatttgtttctttt
cagnnnnnnntaatgagaggatccagcccttattctgtcagtgagggagagcaggaagta
aggagaaaatcgctcaagctaatccttgaaaagaaactggccattttagaaagagctatt
gaaagcaatccaaatgttgttgatctgaaacttgcaaaactgaagctatgtacagaattc
tgggaaccatcaacactcatcagagaatggcaaaaattggtttttttgcatcccaataat
ccagggctgtggcaaaaatatctcttgttctgtcaaagccagttcagcaccttttcagtt
tcgaaagtccatggtttatatggcaaatgcttgagcactttggcagctgtacaggatggc
agcatggtatcacatcctatactgcctggcacggaggaagctatgttagctatttttctt
cagcagtgccattttctaagacaggcaggtcattcggagaaagctgtgtctttgttccag
gctttgattgacttcaccttttttaaacctgacagtgtaaaagatctcccaacaagagga
caggtggagttctttgaaccattttgggacagtggagagcctcggattggagaaaaagga
gcaaaaggctggaaagcatggatgcatcaacaagaaaagggtggctggattgttgtcagt
aagcctgatgatgatgatgatgaggaagatatagatgaagatcaagaaataaaggataaa
actctacccaaatgggaaatttggctggacgttgaaggttcccgtgaagccaggcattgg
gtcccttggcggcctgacaaaacaaagaagcagactgaagaagattgcgaagacccagaa
agacaggtattatctgatgatcttgggccatctttaatcaaactttctaatccagatctt
cagattcagctcttgtactcatttctgcaatttttgggagttccctgtgggtgcagtctc
tttccttcaagtctttatgtagctatggatgaaaacaacatctttgacagtgggaggttg
gatgaaaggccattgacctccttttattcatcatttgctggagttagcagcattggccac
atggacacaatgatcaggaggagacagcacattggtcattgtaaggaaggagaggagttc
atacagaatctatttcacgtaatactgccattgttttcaggaaaagagaagattaacctt
tctgagtgttggttgctatatgaaatctcaaagatcattcagtgcctccaagcaaaaaac
aagaagaaattaaagatacagggaaagaagagcaaaaggctagccaagaatctccttaag
gcatctgagaaccgaaacaacctttccctctggaaactgtatgcctacctggagtggctg
cttggcaacacagatgacgctagaaaagtgtttgatgcagctctttgcatggcacgaact
gaagggatgagagattcccaactctgtaatttgagtcttctttatgctcaactggaagtt
gagctgctggaaagtctagaaggaatggccatgtcacgtgctgttcatatattaaccaaa
ctggttgaaagtggaccatatgtaccatatagtggacaagcattatctgtgaacatcttg
aaagctcgaaagatatacgagcatgcactacaagactatttaagtataacaccaatttct
agccagggtcaagccaacagttgtagccaaatggttagtttggttggttgctatgcactc
tttcagtatttaactgttggaatcgatgctgctgtactaatatataaacagatttctgaa
aaactgaaaggtcttggtctgcagaaatgtgaacgtgttggagaaaatcttggcattcag
aatttcgccactcctcttgaggctgtcacaatgatgcacacaaatttactccaatatcac
atgaaaattagcgtttaccctttgaatcctctgcgagaggtactaacggaggctttgaag
ctgtatcctagcaaccaggctctttggaggtcatatatccaaatccaaaggaagtctcac
aatgctagcaaagcacgaagattttttcatgctgtcacaagatccacagagtccctagag
ccatggctatttgcaattcaagcagaggaaatgagaaaaaagcttgtggagaatgtccag
agggcaaatattggagaaatatattcaaccattcccgaaactggattaacaaatcggatc
atagctttatttgatcatgcagttcagagtgaaaatggtgcccattgtccattgctgtgg
agaatgtatttgaactttctggtttctctaggaaataaagaaagaagcaaaggagtattt
tataaagccattcaaaactgtccttgggcaaaggtgctgtatatggatgcggtagaatat
ctttcagatcagctgcaagagatgcttgacttaatgattgaaaaagaattaagagtccgg
gtgccaatagaagagctggagctgctactagaagtttaa
DBGET
integrated database retrieval system
