Gavialis gangeticus (Gharial): 109299075
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Entry
109299075 CDS
T07453
Symbol
USP47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X1
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
ggn
Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ggn01002
]
109299075 (USP47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ggn04121
]
109299075 (USP47)
Enzymes [BR:
ggn01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
109299075 (USP47)
Peptidases and inhibitors [BR:
ggn01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
109299075 (USP47)
Ubiquitin system [BR:
ggn04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
109299075 (USP47)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
Sad1_UNC
Motif
Other DBs
NCBI-GeneID:
109299075
NCBI-ProteinID:
XP_019375117
LinkDB
All DBs
Position
Unknown
AA seq
1375 aa
AA seq
DB search
MVPSEESQLVPKEDMFWSCRQSIFDEMKKKFSQIESAADEPRVLCIIQDTTNSKTVNERV
TLNLPASTPLRRLFEDVASKVGYVNGTFDLVWGNGVNVADMTPLEQNSDKSILDAGFEPG
KKNFLHLTDKDGEQPHIMSQECSSTDDGTQDRFIGPLPREGSVGCTSDYVSQNYSYSSIL
TKSETGYVGLVNQAMTCYLNSLLQTLFMTPEFRNALYKWEFEESEEDPVTSIPYQLQRLF
VLLQTSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADLINQL
YQGKLKDYVRCLECGYESWRIDTYLDIPLVIRPYGSNQAFASVEEALHAFIQPEILDGPN
QYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDMGTF
IDVEDEKSPQTESCTDSGAENEGSCHSDQMSNDFSNDDGVDEGICLETNSGAERISKVGS
EKNSLLYELFSVMVHSGSAAGGHYYACIKSFSDDQWYSFNDQHVSKITQEDIKKTYGGSS
GSRGYYSSAFASSTNAYMLIYRLKDPTRNAKFLEAHEYPEHIKQLVQKERELEEQEKRQR
EIERNTCKIKLFCMHPVKQIMMENKLEVHKDKTLKEAVEIAYKIMDLEEAVPLDCCRLVK
YDEFHDYLERSYEGEEDTPMGILLGGVKSTYMFDLLLETKRPDQVFQCYKPGEVMVKVHV
VDLKTESVAPPISVRAYLNQTVTEFKQLISKATYLPAETMRVVLERCYNDLRLLNVANKT
LKAEGFFRSNKVFVESSESLDRHLTYTDSQLWKLLDRHANTIRLYVSLPEQSPGSQFKRT
VYQKASGDSGNLDEVCEKVKGSVGNMKSVEAILEESTEKLKSLSLQQQQEGDNGDSSKST
EASDFENIESPLNERDSSASAEHRELENQIQISDPENFQSEERSDSDVNNDRSTSSVDSD
ILSSSHSSDTLCNVENAPIPLANGLDSHSITSSRRSKANEGKKDTWDTAEEDSGTDSEYD
ESGKSRGEAQYMYFKAEPYAADEGSGEGQKWLMVHVDKRITLSAFKQHLEPFVGVPSSHF
KVFRVYASNQEFESVRLNETLSSFSDDNKITIRLGRALKKGEYRVKVYQLLVNETEPCKF
LLDAVFAKGMSVRQSKEELLPQLREQCGLDLTIDRFRLRKKTWKNPGTVFLDYHIYEEDI
NISSNWEVFLEILDGAEKMKSMSQLAVLSRRWRPSEMKLDSFQEVVLESSSVDELKEKLS
EISGIPLENIEFAKGRGTFPCDISVLEIHQDLDWNPKVSTLNVWPLYICDDGAVIFYRDK
TEELMELTDEQRNELMKKESSRLQKTGHRVTYSPRKEKALKIYLDGAPNKDLTQD
NT seq
4128 nt
NT seq
+upstream
nt +downstream
nt
atggtgcccagcgaggagagccagctcgtccccaaagaggatatgttttggagttgcaga
cagagtatctttgatgaaatgaagaagaaattttcacagatagaaagtgctgctgatgaa
cccagagtgctctgtataatacaagataccacaaattctaagacagtaaatgaacgtgtt
actttaaacctgccagcttccactccactgagaaggctgtttgaggacgtggcctctaaa
gtgggctatgttaatggaacttttgatttagtttggggaaatggagtcaatgttgctgat
atgactccattagaacaaaacagtgacaaatctattcttgatgctggttttgaaccagga
aaaaagaattttctccacttgacagacaaagatggtgaacagcctcatataatgtcgcag
gaatgtagttcaacagatgatggtacacaagatagatttataggtcctcttccaagagaa
ggctctgttggttgtaccagtgattacgttagtcaaaactactcatactcttcaatcctg
actaaatcagagacaggctatgtgggattagtaaatcaagcaatgacttgttatctgaac
agtcttctacaaacacttttcatgactcctgaattcagaaatgcattatacaagtgggaa
tttgaagagtctgaagaagatccggtgacaagcattccttaccaacttcaaagactgttt
gttttattgcaaaccagcaaaaaaagagcaattgaaactacagatgttacacggagtttt
ggatgggatagtagtgaggcatggcagcagcatgacgtacaggaactatgcagagttatg
tttgatgctttggagcagaaatggaagcaaacagagcaggcggatctcataaatcagctg
tatcaaggcaaactgaaggactatgtaagatgtctggaatgtggctacgagagctggaga
atcgacacttacttggatattcctttggtcatccggccttatggctccaaccaggcattt
gctagcgtggaggaagctctacatgcgtttattcagcctgagatccttgatggtcccaat
cagtatttctgtgaacgctgtaagaagaaatgtgatgccaggaaggggttacgatttttg
cattttccatacctgttaaccttacagctgaagagatttgactttgattataccactatg
cataggattaaacttaatgaccgtatgacttttcctgaagagctagatatgggcacattc
attgatgttgaagatgagaagtctcctcaaacagagagttgcactgatagtggagcagag
aatgaaggcagttgtcacagtgatcaaatgagcaatgatttctcaaatgatgatggagtt
gatgaaggaatctgccttgaaaccaatagcggtgcagaaagaatttcaaaagttggcagt
gaaaagaattctttattgtatgaactcttttctgttatggtccattcgggaagtgctgct
ggtggccattactatgcctgtataaagtcctttagtgatgatcagtggtacagcttcaat
gatcagcacgttagcaagataacccaagaagacattaaaaagacgtacggtggatcatct
ggaagcagaggctattattccagtgcttttgctagctccacgaatgcgtacatgcttata
tatagactgaaggatccaacaagaaatgcaaaattccttgaagcacatgaatatccagag
cacattaagcaactggtacaaaaagaacgagagttagaagagcaagaaaaaaggcaacgt
gaaattgagcgcaatacttgcaagataaaattgttctgcatgcatcctgtaaaacagata
atgatggaaaataaattagaagttcataaggacaaaacactgaaagaagcagtagaaata
gcctacaagataatggatttagaagaagcagttcctttggattgttgtcgtcttgttaaa
tatgatgagttccatgattatttggagcgatcatatgaaggtgaagaggatacgccaatg
ggaatcttacttggaggagtcaaatcaacctacatgtttgacctgcttctagaaacaaaa
agacctgaccaagttttccagtgctataaacctggtgaggtcatggtaaaggttcatgtg
gttgacctaaagacagaatctgttgctccgcctatcagtgtccgagcctatttgaaccag
acagttactgaattcaaacagcttatttcaaaggctacttacctgcctgctgaaacaatg
cgggtagtgctagaacgttgctacaatgacttgcgccttctcaatgttgccaacaaaaca
ctgaaagcagaaggcttttttagaagtaataaggtgtttgttgaaagttcagagtctttg
gatcgccacctgacttacacagattctcagttatggaaacttttggatcgtcatgcaaat
acaataagactgtatgtttcattaccagaacagtctcctggatctcagtttaaaagaaca
gtttaccagaaagctagtggagattcaggtaatttggatgaagtttgtgaaaaagtaaaa
ggttctgtaggtaatatgaaatctgtagaggctatcctagaagaaagcactgaaaaactc
aaaagtttgtcactgcagcagcagcaggagggagacaacggagacagcagcaagagcaca
gaagcaagtgactttgaaaacattgagtcgcctttgaatgagagagattcttcagcatca
gcagaacacagagaacttgaaaaccaaattcagatttctgatccagaaaacttccagtca
gaggagcgatcggattctgatgtgaataatgataggagcacaagttctgtggacagtgat
attcttagttctagtcatagcagtgacactttatgtaatgttgaaaatgcccccatccct
ttggctaatggacttgattctcatagtatcacaagtagtaggagatctaaagcaaatgaa
ggaaaaaaggacacctgggatacagctgaagaagattctggaactgatagcgaatatgat
gaaagtggcaagagtagaggagaagcgcaatatatgtacttcaaggcagaaccctatgct
gcagatgaaggttcaggagaaggacagaaatggttgatggtgcatgttgacaaaagaatt
acactgtctgctttcaagcaacacttggagccctttgttggagttccatcctctcacttc
aaggtctttcgcgtctatgccagcaatcaagagtttgagagtgttcggctgaatgaaaca
ctttcatcattttctgatgacaacaagataactattagacttggaagagcacttaagaag
ggggagtatagagtcaaagtgtaccagcttttggtaaatgaaacagagccatgcaagttt
cttttagatgctgttttcgctaaaggaatgtctgttcggcagtcaaaagaggaactactc
cctcagctcagagagcagtgtgggttagatctaaccattgacaggtttcgcttacgaaag
aaaacctggaagaacccaggcactgtattcctcgattatcatatttatgaagaagatatt
aatatttcaagcaactgggaggttttcctagaaatacttgatggagcagaaaaaatgaaa
tccatgtcacagcttgctgttttgtcaagacgatggagaccatctgagatgaagctggat
tctttccaggaagtagtgctggaaagcagcagtgttgatgaattaaaagagaagcttagt
gaaataagtggcatacccttagaaaacatagaatttgcaaagggtagaggaacatttcct
tgtgacatttcagtactagagatccaccaggacctggactggaatcctaaagtatctaca
ctgaatgtctggcctctctacatttgtgatgatggcgcagtaatattttatagggataaa
actgaagaattaatggaattgacagatgagcagagaaatgaactaatgaaaaaagaaagc
agcagactccagaaaactggacaccgtgtaacctactcccctcgtaaagaaaaagcacta
aaaatttatctggacggagcaccaaataaagatttgactcaagactga
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integrated database retrieval system
