Gavialis gangeticus (Gharial): 109299118
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Entry
109299118 CDS
T07453
Symbol
SOX6
Name
(RefSeq) transcription factor SOX-6 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
ggn
Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ggn03000
]
109299118 (SOX6)
Transcription factors [BR:
ggn03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
109299118 (SOX6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
109299118
NCBI-ProteinID:
XP_019375186
LinkDB
All DBs
Position
Unknown
AA seq
820 aa
AA seq
DB search
MPSSSEVLAGVVGESRTEEWKNSHYIRMSSKQATSPFACAADGEEAVTQDLASRDKEEGN
NDQHATSHLPLHTIMHNKSHSEELPTLVTTIQQDAEWDSVISAQHRMESESNKLCSLYSF
RNTSTSPHKPDEGGRDRSELMTSVNFGTPERRKGSLADVVDTLKQKKLEEMTRTEQEDSS
CMEKLLSKDWKEKMERLNTSELLGEIKGTPESLAEKERQLSTMITQLISLREQLLAAHDE
QKKLAASQIEKQRQQMDLARQQQEQIARQQQQLLQQQHKINLLQQQIQQVQGHMPPLMIP
IFPHDQRTLAAAAAAQQGFLFPPGITYKPGDNYPVQFIPSTMAAAAASGLSPLQLQQLYA
AQLASMQVSPGAKMPTTPQPPNTTGALSPTGMKNEKRGTSPVTQVKDEAAQPLNLSARPK
TAEPVKSPTSPTQNLFPASKSSPVNVSNKSGIPSPIGGPLGRGSSLDILSSLNSPALFGD
QDTVMKAIQEARKMREQIQREQQQQQQQPPPHTVDGKLPSMNNMGLNNCRNEKERTRFEN
LGPQLTGKPSEDGKLGPGVIDLTRPEDAEGSKAMNGSAAKLQQYYCWPTGGATVAEARVY
RDSRGRASSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQ
PYYEEQARLSKIHLEKYPNYKYKPRPKRTCIVDGKKLRIGEYKQLMRSRRQEMRQFFTVG
QQPQIPITTGTGVVYPGAITMATTTPSPQMTSDCSSTSASPEPSIPVIQSTYGMKTDSGS
LAGNEMINGEDEIEMYEDYEDDPKSDYSSENEAPEAVSAN
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgccatcaagttctgaagtgctggctggtgtggtaggagaaagcaggacagaagagtgg
aagaacagtcattatataagaatgtcttccaagcaggccacctctccatttgcctgtgca
gctgatggagaggaagcagtgacccaggacttagcatcacgagacaaagaagagggaaac
aatgatcagcatgcgacctctcatctgcctctgcacaccataatgcacaacaagtctcac
tctgaggaattaccgactctagtcaccaccatccaacaagatgctgagtgggacagtgtt
atctcagcccagcatagaatggagtcagagagtaataagttatgttccctatattccttc
cgaaatacctctacctcaccacacaagcccgacgaaggaggtcgtgaccgcagtgagcta
atgaccagtgttaattttggaacgccagaacgccgcaaaggaagccttgctgatgtggtg
gacacactgaaacagaagaaattagaggaaatgaccagaactgaacaggaggactcatcc
tgcatggaaaagctactttctaaagactggaaggagaaaatggaaagactgaacacaagt
gagctccttggagaaattaaaggtacaccagaaagcctggcagaaaaagagcgacagctc
tctaccatgatcacccagctgatcagtttacgggagcagctcctggctgcccatgatgaa
cagaaaaagctggcagcctcacaaattgaaaaacaacggcagcaaatggaccttgctcgc
caacagcaagaacagattgcaagacaacaacagcaacttctgcaacagcagcacaaaatc
aatctactgcagcagcaaattcagcaggttcagggtcacatgcctccgctcatgatccca
atttttccacacgaccagcggacattggcagcggctgctgcagcccaacagggattcctc
ttccccccaggaataacttacaagccaggtgataactaccctgtgcagttcattccatca
acaatggcagctgctgctgcttctggactcagccctttacagctccagcaactctatgca
gctcagctggccagcatgcaggtttctcctggagccaagatgccaactactccacagcca
ccaaacacaacaggggcactgtcacctactggaatgaaaaatgaaaagagagggaccagc
cctgtaactcaagttaaggatgaagcagcacagccactgaatctctcagcccgacccaag
acagctgaacctgtcaaatccccgacatctccaacacagaacctcttcccagctagtaaa
agcagcccagtgaatgtgtcaaataaaagtggcatccccagccctattggtggaccgttg
ggaagaggatcctctttagatatcctttccagtcttaactcacctgccctatttggggac
caggacacagtaatgaaagctattcaggaggctcgaaagatgagagaacagatccagagg
gagcagcaacagcagcagcagcagccgcctccacacactgttgatggaaaactgccttcc
atgaataacatggggctaaacaactgcaggaatgaaaaggaaagaacacgatttgagaat
ctaggcccacaattaacaggaaaacccagtgaagatggaaaactcggcccaggagtcata
gaccttacaaggccagaagatgcagaaggaagtaaagcaatgaatggctctgcagctaaa
ctacagcagtattattgttggccaacaggaggtgccactgtggctgaagcgcgagtctac
agagattcacggggccgagccagtagcgaaccgcatatcaaacgaccaatgaatgctttc
atggtttgggcgaaggatgaacgtcgaaaaattctccaagcttttcctgacatgcataac
tccaacattagcaaaatcctaggctctcgctggaagtccatgtctaatcaagagaaacaa
ccttactatgaagagcaggcacggctaagtaaaatccatctagagaagtatcctaactac
aaatacaaaccccgaccaaaacgtacctgcattgttgatggcaagaaactgcgtattgga
gaatataagcaactgatgagatctcgaagacaggagatgaggcagttttttactgtagga
cagcagcctcagattccaatcaccacaggaacaggtgttgtctatcctggtgctattacc
atggcaactaccacaccatcacctcagatgacatctgattgctctagcacttctgccagc
cctgagcccagcatccctgtcattcagagcacttatggtatgaagacggacagcggaagc
cttgctggaaacgaaatgataaatggagaggatgaaatagaaatgtacgaggactatgag
gatgatcccaaatcagactatagcagtgaaaatgaagcccctgaggcagtcagtgccaac
tga
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