Gorilla gorilla gorilla (western lowland gorilla): 101143937
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Entry
101143937 CDS
T02442
Symbol
DDX60
Name
(RefSeq) probable ATP-dependent RNA helicase DDX60
KO
K20103
ATP-dependent RNA helicase DDX60 [EC:
5.6.2.7
]
Organism
ggo
Gorilla gorilla gorilla (western lowland gorilla)
Brite
KEGG Orthology (KO) [BR:
ggo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ggo03019
]
101143937 (DDX60)
Enzymes [BR:
ggo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101143937 (DDX60)
Messenger RNA biogenesis [BR:
ggo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
101143937 (DDX60)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
101143937
NCBI-ProteinID:
XP_030866354
Ensembl:
ENSGGOG00000012801
LinkDB
All DBs
Position
4:complement(165903892..166007249)
Genome browser
AA seq
1712 aa
AA seq
DB search
MERNVLTTFSQKMSQLILNEMPKAEYSSLFNDFVESEFFLIDGDSLLITCICEISFKPGQ
NLHFFYLVECYLVDLISKGGQFTIVFFKDAEYAYFNFPELLSLRTALILHLQKNTTIDVR
TTFSRCLSKEWGSFLEESYPYFLIVADEGLNDLQTQLFNFLIIHSWARKVNVVLSSGQES
DVLRLYAYLLPSMYRHQIFSWKNKQNIKDAYTTLLNQLERFKLSALAPLFGSLKWNNITE
EAHETVSLLTQVWPEGSDIRRVFCVTSCSLSLRMYHRFLGNREPSSGQETEIQQVNSNCL
TLQEMEDLCKLHCLTVVFLLHLPLSQRACARVITSHWAEDMKPLLQMKKWCEYFILRNIH
TFEFWNLNLIHLSDLNDELLLKNIAFYYENENVKGLHLNLGDTIMKDYEYLWNTVSKLVR
DFEVGQPFPLRTTKVCFLEKRPSPIKDSSNEMVPNLGFIPTSSFVVDKFAGDILKDLPFL
KSDDPIVTSLVKQKEFDELVHWHSHKPLSDDYDRSRCQFDEKSRDPRVLRSVQKYHVFQR
FYGNSLETVSSKIIVTQTIKSKKDFSGPKSKKAHETKAEIITRENKKRLFAKEEQKEEQK
WNALSFSIEEQLKENLHSGIKSLEDFLKSCKSSSVKLQVEMVGLTACLKAWKEHCRSEEG
KTTKDLSIAVQMMKRIHSLMEKYSELLQEDDRQLIARCLKYLGFDELASSLHPTQDAEND
VKVKKRNKYSLGIGPARFQLQYMGHYLIRDERKDPDPRVQDFIPDTWQRELLDVVDKNES
AVIVAPTSSGKTYASYYCMEKVLKESDDGVVVYVAPTKALVNQVAATVQNRFTKNLPSGE
ALCGVFTREYRHDALNCQVLITVPACFEILLLAPHRQNWVKKIRYVIFDEVHCLGGEIGA
EIWEHLLVMIRCPFLALSATISNPEHLTEWLQSVKRYWKQEDKIIENNTASKRHVGRQAG
VPKDHLQVKQSYKVRLVLYGERYNDLEKHVCSIKHGDIHFDHFHPCAALTTDHIERYGFP
PDLTLSPRESIQLYDAMFQIWKSWPRAQELCPENFIHFNNKLVIKKMDARKYEESLKAEL
TSWIKNGNVEQARMVLQNLSPKADLSPENMITMFPLLVEKLRKMEKLPALFFLFKLGAVE
NAAESVSTFLKKKQETKRPPKADKEAHVMANKLRKVKKSIEKQKIIDEKSQKKTRNVDQS
LIHEAEHDNLVKCLEKNLEIPQDCTYADQKAVDTETLQKVFGRVKFERKGEELKALAERG
IGYHHSAMSFKEKQLVEILFRKGYLRVVTATGTLALGVNMPCKSVVFAQNSVYLDALNYR
QMSGRAGRRGQDLMGDVYFFDIPFPKIGKLIKSNVPELRGQFPLSITLVLRLMLLASKGD
DPEDAKAKVLSVLKHSLLSFKQPRVMDMLKLYFLFSLQFLVKEGYLDQEGNPMGFAGLVS
HLHYHEPSNLVFVSFLVNGLFHDLCQPTRKGSKHFSQDVMEKLVLVLAHLFGRRYFPPKF
QDAHFEFYQSKVFLDDLPEDFSDALDEYNMKIMEDFTTFLRIVSKLADMNQEYQLPLSKI
KFTGKECEDSQLVSHLMSCKEGRVAISPFVCLSGNFDDDLLRLETPNHVTLGTIGVNRSQ
APVLLSQKFDNRGRKMSLNAYALDFYKHGSLIGLVQDNRMNEGDAYYLLKDFALTIKSIS
VSLRELCENEDDNVVLAFEQLSTTFWEKLNKV
NT seq
5139 nt
NT seq
+upstream
nt +downstream
nt
atggaaagaaatgttcttacaacattttcacagaaaatgtcccagttaattttgaatgaa
atgccaaaagctgaatattccagtttattcaatgattttgttgaatctgaattttttttg
attgatggggattcattacttatcacatgtatctgtgagatatcatttaagcctgggcag
aacctccatttcttctatctggttgaatgctatcttgtggatcttattagcaaaggagga
caattcaccatagttttcttcaaggatgccgagtatgcgtatttcaacttccctgaactt
ctttctttgagaactgctttaattcttcatcttcagaagaataccaccattgatgttcga
acaacattttcgagatgcttatcaaaagagtggggaagtttcttggaagagagttaccca
tatttcctgatagttgcagacgaaggcctgaacgatctacaaacacagcttttcaacttt
ttaatcattcattcttgggcaaggaaggtcaacgttgtactttcctcagggcaagaatct
gatgttcttcgcctttatgcataccttcttccaagcatgtacagacaccagattttttcc
tggaagaataagcagaacattaaagatgcttatacaaccctgcttaaccagttggaaaga
tttaagctttcagcattagcacctctttttggaagtttaaaatggaataatattacggaa
gaggcacacgagactgtatctctgcttacacaagtctggccagaaggatctgacattcgg
cgtgtcttttgtgttacttcatgctcattatctttgagaatgtaccatcgctttttagga
aacagagagccctcctctggtcaggaaactgagatccaacaggtgaacagtaattgctta
accctgcaggagatggaagatttgtgtaaactgcattgtctcactgtggtttttctactc
catctgcctctttctcaaagagcttgtgctagagtcatcacttcccattgggctgaggac
atgaagcctttattacaaatgaaaaagtggtgtgaatatttcatcttaagaaatatacat
acttttgaattttggaatctgaatttaattcacctttctgacttaaatgatgagcttttg
ttgaagaatattgctttttactatgaaaatgaaaatgtaaaaggcctacatttgaatttg
ggagataccattatgaaagattatgaatatctctggaataccgtatcaaagttggtcaga
gactttgaggttggacagccatttcctctgagaacaacaaaagtttgttttcttgaaaag
agaccatcaccaatcaaagacagctccaatgaaatggtgcccaatttgggttttattcca
acgtcatcttttgtggttgataaatttgctggagatattttgaaagatttgccttttcta
aagagtgatgatcctattgttacttcactggttaagcaaaaggaatttgatgaacttgtg
cactggcattctcataaacccctgagtgatgattatgacaggtccaggtgtcagtttgat
gaaaaatctagagaccctcgtgttcttagatctgtgcaaaagtatcatgttttccaacgg
ttttatgggaattcattagaaacagtctcttcgaaaatcatcgtgactcaaactattaag
tcaaagaaggattttagtgggcccaagagcaaaaaggcacacgagaccaaggctgaaata
attactagagagaataagaaaaggttatttgccaaggaagaacaaaaggaagagcaaaag
tggaatgctttgtcattttctattgaagagcaattgaaagaaaatttacactctggaata
aagagcctggaagattttttgaaatcctgtaaaagtagctctgtgaaacttcaggttgaa
atggtggggttaactgcttgcttgaaagcctggaaagaacattgccgaagtgaagaaggt
aaaaccacgaaagatttaagtatagctgttcaaatgatgaaaaggatccactccttgatg
gaaaaatactcagaacttttacaagaagatgatcggcaactcatagccagatgccttaag
tatttaggatttgatgagttggcaagttctttacatccaacccaggatgcagaaaatgat
gtaaaagtgaagaaaaggaataaatattcacttggcattgggccagctcggttccaactg
caatacatgggccattatttgatacgagatgagagaaaagacccagatcccagggttcag
gattttattcccgacacatggcagcgagagctccttgatgttgtggataagaatgagtca
gcagtgattgttgccccaacgtcctcaggcaaaacctatgcctcctactactgcatggag
aaagtgctgaaggagagcgacgacggggtggtcgtgtacgttgcacccacaaaggccctt
gttaatcaagtggcagcaactgttcagaatcgttttacgaaaaatctgccaagtggtgaa
gctctctgtggtgttttcaccagggagtatcgtcatgatgccttaaactgtcaggtactt
attacagtgcctgcctgctttgaaattctgctgcttgctcctcatcgccaaaactgggtg
aaaaagatcagatatgttatatttgatgaggttcattgtcttggtggagaaattggagca
gaaatctgggaacatctccttgtcatgatccgatgtccctttttggctctttcagctacc
ataagtaatcctgaacatctcaccgagtggctacaatcggtaaaacggtactggaaacaa
gaagacaaaataattgaaaacaataccgcttctaaaaggcatgtgggtcgtcaggccggc
gttcccaaagaccacttgcaagtaaaacaatcgtataaagttagacttgtgctctatgga
gagaggtataatgatctagagaagcatgtatgttcaataaaacatggtgacattcatttt
gatcattttcacccatgtgctgcactaacaacagatcatattgaaaggtatggattccct
cctgatcttaccctttcacctcgagaaagcatccagctgtatgatgccatgtttcaaatt
tggaaaagttggccccgggcccaggaactgtgcccagaaaacttcattcattttaacaat
aaattagtcattaaaaagatggatgctagaaaatatgaagagagtctaaaggcagaatta
acaagttggattaaaaatggcaacgtagagcaggccagaatggtacttcagaatcttagt
cctaaagcagatttgagtccagaaaacatgatcaccatgtttccacttctagttgaaaaa
ctgaggaaaatggagaagttacctgcactattttttttattcaagttaggagctgtagaa
aacgcagctgaaagtgtgagcactttcctaaagaaaaagcaggagacaaaaaggcctccc
aaagctgataaagaagcccatgtcatggctaacaaacttcgaaaagttaaaaaatccata
gagaaacaaaagatcatagatgaaaagagccagaaaaaaaccagaaatgtggatcaaagc
ctaatacatgaagctgaacatgataatctagtgaagtgtctagagaagaacctggaaatc
ccacaggactgcacatatgctgatcaaaaagcagtggacactgagactttgcagaaggta
tttggtcgagtaaaatttgaaagaaaaggtgaagaattgaaagccttggcagaaaggggt
attggatatcatcacagtgctatgagtttcaaagaaaaacaattagttgaaatcctcttt
agaaaaggatatcttagggtggtgacagctactggaacacttgctttaggtgtcaacatg
ccttgtaaatctgtggtttttgctcaaaactcagtctatctggatgcgttgaattataga
cagatgtctggccgtgctggaagaagaggtcaagacctgatgggagatgtatatttcttt
gatattccattccccaaaataggaaaactcataaaatccaatgttcctgagctgagagga
cagttccctctcagcataaccctggtcctgcgactcatgctgctggcttccaagggagat
gacccagaggatgccaaggcaaaggtgctatcagtgctaaagcattcattgctgtccttc
aagcaacccagagtcatggacatgttaaaactttacttcctgttttctttgcagttcctg
gtgaaagagggctatttagatcaagaaggtaatcctatggggtttgctggacttgtatca
catttgcattatcatgaaccttctaatcttgtttttgtcagttttcttgtaaatggcctc
ttccatgatctctgtcagccaaccaggaaaggctcaaaacatttttctcaagacgttatg
gaaaagctagtattagtattggcacatctctttggaagaagatattttccaccaaagttc
caagatgcacacttcgagttttatcaatcaaaggtgttccttgatgatctccctgaggat
tttagtgatgctttagatgaatataacatgaaaattatggaggactttaccactttccta
cgaattgtttccaaactggctgatatgaatcaggaatatcaactcccattgtcaaaaatc
aaattcacaggtaaagaatgtgaagactctcaactcgtatctcatttgatgagctgcaag
gaaggaagagtagcaatttcaccatttgtttgtctgtctgggaactttgatgatgatttg
cttcgactagaaactccaaaccatgttactctaggcacaatcggtgtcaatcgctctcag
gctccagtgctgttgtcacagaaatttgataaccgaggaaggaaaatgtcgcttaatgcc
tatgcactggatttctacaaacatggttccttgataggattagtccaggataacaggatg
aatgaaggagatgcttattatttgttgaaggattttgcactcaccattaaatctatcagt
gtttccttgcgtgagctatgtgaaaatgaagacgacaacgttgtcttagcctttgaacaa
ctgagtacaactttttgggaaaagttaaacaaagtctaa
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integrated database retrieval system
