Gossypium hirsutum (upland cotton): 107886342
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Entry
107886342 CDS
T04793
Name
(RefSeq) ADP-ribosylation factor GTPase-activating protein AGD2 isoform X1
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
107886342
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107886342
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ghi04147
]
107886342
Membrane trafficking [BR:
ghi04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
107886342
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
107886342
Exosome [BR:
ghi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
107886342
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3
ArfGap
PH
Ank
Ank_2
Ank_3
BAR
Ank_5
Ank_4
PH_11
PH_8
PH_20
PH_13
BAR_2
Motif
Other DBs
NCBI-GeneID:
107886342
NCBI-ProteinID:
XP_016665740
UniProt:
A0A1U8HI56
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Position
A03:73278028..73328734
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AA seq
783 aa
AA seq
DB search
MSAFLKLEDSPMFQKQIWSLEHMADDLKNRCQILYKGSKRFMAALGEAYNGDNSFADSLE
AFGGAKDEPYSLSIGGFQGPIMSKFIKAFRELASYKELLRSQVEHVLIDQLMHFMNVDLQ
DAKESRRRFDKAISTYDQAREKFVSLKKNTPGDIVAELEEDLQNSKSSFERSRFNLVNAL
MNIEAKKKYEFVESISAIMDSHLKYFKLGFELLKQLEPFIHQVYTYAQQAKELANAEQCS
LEKRIQEFRTQAEIDIIKASSNIEPSTSSVGICVTGMNSDKNIEAIMQSSRNGEVQTIKQ
GYLLKRSSSLRGDWKRRFFVLDSQGTLYYYRNKGIKPTGFLHHYAGSAEYNGGVFARFRA
KYRTSSCEDNLGCRTVDLCTSTIKMGAEDTDLRLCFRIISPLKTYTLQAENAGDRTDWVN
KITAVITSLLSSHILQQHVENNDYARKASSNVMLRNNHHTSDDQIGNRAESVSAVLREIP
GNDVCAECNAHEPDWASLNLGILLCIECSGVHRNLGVHISKVRSLTLDVKVWEPSIVELF
RTLGNAYCNSIWEGSLLKNERVDESNAINTSITKPCPKDAICDKEKYINAKYVNKLLVSR
DPMQLGVSQNSINIWQAVKADNIREVYRLITVSDTNMVNTTFDDVFSVEWYHHVDAQNSS
IDIHNEHLIQNDPSACQRIKNSNDPGSCLQGCSLLHLACQRSNPVMVELLLQFSADINMR
DYHGRTPLHHCIAIGKNPLAKHLLKRGARSSIRDGGGFSALDRAMEKGAITDEGLLILLS
ESE
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcctttctcaagcttgaagattcacctatgtttcaaaagcagatatggtctttg
gagcacatggctgacgatttgaaaaatcgctgtcaaatactgtataaaggaagcaaaagg
tttatggcagcccttggagaggcatataatggagacaatagctttgctgattctttagaa
gcatttggtggtgcgaaggatgaaccttatagtttatctataggaggtttccaagggccg
atcatgtccaagttcatcaaagcttttcgtgagcttgctagttataaggagttgcttcgt
tcacaagtggagcatgtgttaattgatcagttaatgcactttatgaatgttgatttgcaa
gatgcaaaggagtctcgtcgacggtttgacaaagctataagtacatacgatcaggcacgt
gaaaagtttgtgtctttgaagaagaatacgccaggagatattgttgctgagctagaagag
gatctacaaaattcaaaatcttcttttgagagaagccgcttcaatttagtaaatgcgcta
atgaatattgaagctaaaaagaagtacgaatttgtggaatctataagtgcaattatggat
agccatcttaaatattttaagttggggtttgaattattgaagcagttggaaccatttatt
caccaggtatatacatatgctcaacaggcaaaagaattagcaaatgctgagcagtgtagc
cttgaaaaacgtattcaagaatttaggacccaagcagagatagatattataaaagcttca
agtaacatagagccttcaacaagttctgttggcatttgcgttacgggcatgaattcagac
aaaaatatagaagcaatcatgcagtcctcaagaaatggggaggtccagacaatcaaacaa
ggatatttgctgaaacgttcttcaagtttgaggggagattggaagaggaggttctttgta
cttgatagtcaggggacactatactattataggaataagggtatcaaaccaacgggtttt
ctccatcattatgctggttcagctgaatataacggtggtgtatttgctagatttcgtgca
aagtataggacatcatcttgcgaagacaatttgggttgtcgtaccgttgacctttgtact
tcaacaataaagatgggcgcagaggatacagatttacggctttgttttaggatcatatct
ccgctgaagacttacacgttgcaggctgaaaatgcgggagatagaacggactgggttaat
aaaataactgctgttattacatctcttttgagctctcatatcctgcagcagcatgtggaa
aacaacgattatgctcgcaaagcttcttctaatgttatgttacgtaataaccaccatact
tcagatgatcaaataggcaacagagcagaatccgtttctgcagtcctcagagaaattcct
ggaaatgatgtttgtgcagagtgcaatgctcatgaacctgattgggcttctcttaatctc
ggcatattattatgcatcgaatgctctggtgttcaccgtaatcttggtgtacatatttca
aaggtgagatctttgacgttagatgtcaaagtgtgggaaccttcaattgtggaattattt
cgtaccctgggaaatgcttattgtaactctatttgggaaggttcactccttaagaatgag
agagtggatgaatcaaatgctattaacacatcaataacaaaaccatgtcccaaagatgca
atttgcgataaagagaaatatattaatgctaagtatgtaaacaaactgctggtcagcaga
gatccaatgcaacttggagtgtctcaaaactcaataaacatctggcaagcagttaaggct
gataatatacgagaagtatatcgtctaattacagtgtcagacaccaatatggtaaatacc
acctttgatgatgttttcagcgttgagtggtatcaccatgttgatgctcaaaactcgtca
attgatatccataatgagcacttgatacagaatgatccatcagcctgtcagagaatcaag
aattcaaatgatccggggagttgtctacaaggttgttcactgttgcatctggcttgccaa
cgtagcaaccctgtaatggttgagttgttgctgcagtttagtgccgatataaatatgcgc
gattaccatggcaggactcctttgcaccattgcattgctataggcaagaacccgttggca
aagcatctactaaaaagaggtgcacggtcttcaattagggatggtgggggatttagtgca
ttagatagggctatggagaagggagcaattacagatgaggggctacttattttgctcagt
gaaagcgaatga
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