KEGG   Gossypium hirsutum (upland cotton): 107886576
Entry
107886576         CDS       T04793                                 
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1 homolog isoform X1
  KO
K22544  deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    107886576
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ghi03400]
    107886576
DNA repair and recombination proteins [BR:ghi03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     107886576
SSDB
Motif
Pfam: HD HD_assoc_2 Sterile
Other DBs
NCBI-GeneID: 107886576
NCBI-ProteinID: XP_016666064
UniProt: A0A1U8HRW0
LinkDB
Position
A03:99366898..99371457
AA seq 481 aa
METNGNEEVTSLYSLSCRDRRFSKHIHDNVHGNIYLDPFFLQFVDTEQFQRLRELKQLGL
THMVYPGAVHSRFEHSLGVYWLAGEAVHTVQGHQGSEINIERNDIRTVKLAGLLHDVGHG
PFSHLFEREFLPRVLNGSEWSHEDMSVKMIDYIVDAQHIEIDAAILNNVKEMVLASSANA
SQNTVNEKRFLYDIVANGRNGIDVDKFDYIVRDSRACGLGCNFQFQRLLETMRVMGDEIC
YRAKDYLTVHKLFATRADLHRTVYTHAKVKAIELMVVDALTLANGELSISASIQEPAKFW
KLDDSILRQIETSDKQELKKARDLVLRIRRRDLYQFCNEFAVPKDKQEHFKDITPQDIVC
SQKNGDTPLNEEDISVSIVKIDLTRGRSNPLERFGEALLACISTSSIKFFQDYESDYKFP
IRDERISHLLPAFCQDMIVRVYSKKPELVGAVSKAFENYQLKTYGLKAQVHDTPEKKKRR
V
NT seq 1446 nt   +upstreamnt  +downstreamnt
atggaaacgaatgggaacgaggaagtgacgagcttgtactctttgtcctgccgtgatcga
cggttctcgaagcacatccatgacaacgtccacggcaacatctaccttgatccgttcttc
ttacaatttgttgacacagagcagtttcagagacttcgcgagctaaagcaacttggtcta
acgcacatggtgtaccctggagctgttcattctcgctttgagcattctctgggagtttat
tggctggctggtgaagctgttcatacagttcaaggtcaccaaggctcagagatcaacatt
gaacgtaatgatatcagaacagtaaaacttgctggactactgcatgatgttggacatgga
ccattcagccatctgtttgagcgcgagtttcttccccgggttcttaatggatctgaatgg
tctcatgaggacatgtcagtgaagatgattgattacattgttgatgcgcaacacattgaa
atagatgctgcaatcctaaacaatgtgaaggaaatggtacttgctagctcagcaaatgct
tcacaaaatactgtgaatgaaaagcgttttttgtatgacattgttgcaaatggtcgaaat
gggatagatgttgataaatttgactatattgtacgtgactctcgtgcttgtggccttggc
tgcaattttcagtttcaaagattactggaaacaatgagagtgatgggtgatgagatatgt
taccgggccaaggattatctgactgtccacaagttatttgctactcgagctgatttacat
agaacggtttatacgcatgctaaagtaaaggcaatagaactcatggttgtagatgcttta
acattagcaaatggtgaacttagtatatcagcctcaatccaagagccagctaaattttgg
aagttggacgattcaatattaagacaaattgaaacttctgataaacaagagctcaagaag
gccagagatctggtccttcgcatccggagaagagatctgtaccagttctgtaatgagttc
gctgttccaaaggacaaacaagaacatttcaaggacatcactcctcaagatattgtttgc
tctcagaaaaatggtgacactccattgaatgaggaagacatttctgtgagcatcgtgaaa
atcgacctgactcgtgggaggagtaaccctctcgaaagatttggtgaggctctccttgca
tgtatttccacatccagcataaagtttttccaggattatgagagcgattacaaatttccg
ataagagatgagcgcataagtcacttgctgcctgcattttgtcaagatatgattgtcaga
gtatactccaagaaacctgaactggtaggagcagtttctaaggcctttgaaaattatcag
ctaaagacatatggattgaaagcacaggttcatgatactcctgagaagaagaaacgtcgg
gtgtaa

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