Gossypium hirsutum (upland cotton): 107894373
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Entry
107894373 CDS
T04793
Name
(RefSeq) putative multidrug resistance protein
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
107894373
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ghi02000
]
107894373
04147 Exosome [BR:
ghi04147
]
107894373
04090 CD molecules [BR:
ghi04090
]
107894373
Enzymes [BR:
ghi01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
107894373
Transporters [BR:
ghi02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
107894373
Exosome [BR:
ghi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
107894373
CD molecules [BR:
ghi04090
]
Proteins
107894373
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
Zeta_toxin
AAA_29
AAA_16
ABC_ATPase
AAA_30
AAA_22
DUF87
RsgA_GTPase
DLIC
AAA_25
nSTAND1
AAA_15
Motif
Other DBs
NCBI-GeneID:
107894373
NCBI-ProteinID:
XP_040941265
LinkDB
All DBs
Position
A13:complement(95596791..95601362)
Genome browser
AA seq
1252 aa
AA seq
DB search
MVSKDGMFRYADNVDKLLMFFGTLGSIGDGLQYPLTMLVLSKVINEYGDPNAKLSNDTVD
KYALRLLYVAIVVGLSAFVEGVCWTRTAERQTSRIRTKYLKSVLRQEVGFFDTQETGIST
TFQVVSTISADANAIQVAICDKIPNCLAFLSTFFFCLVVSFILSWRITLAAIPLTLFFIV
PGLVFGKLMMDVIMKMIESYGVAGGIAEQAISSIRTVYSYVAENQTIEKFSHALERTLEL
GVNQGFAKGLLMGSMGSIYVGWAFQAWVGTYLVTEKGEKGGSVFAAGINVVMGGLSVLGA
LPNLTGITEATVAATRIFEMVNRDPSIDADDSKGKALSYVRGEIEFKDIYFSYPSRPDSP
VLQGLNLRIPAGKSVGLVGGSGSGKSTTIALLQRFYDPNDGEVLLDGYKIRRLQLKWLRS
QMGLVSQEPVLFATSIKENILFGKEEASMEDVISAAKVANAHDFIVKLPEGYETHVGQFG
FQMSGGQKQRIAIARALIRDPRILLLDEATSALDAQAERIVQEAIDKASKGRTSIIIAHR
LMTIRNANLIVVLQDGRVIESGSHNELMQMNDGEGGEYHRMVELQKMALQNEVSDDSSYK
TEGRYHHRVNVAQSPMSYRSSAASTPALSPFSPALSVGTPYSYTIQYDPDDDSIDENFKQ
VSHPTPSQWRLLKMNAPEWGRALVGSVAAIGSGAVQPINAYCVGLLISIYFRGNKSEIKS
KSRTLSFVFLGIAALNFTSSLLQHYNFAIMGEKLTKRVREKFLEKLMTFEVGFFDEEENT
SAAICTRLATEASMVRSLVGDRMSLLVQAIFGSIFAYIVALKLSWRLSLVMIAVQPLVVG
SFYARSMLMKSMSGKAQKAQKEGSQLASEAVVNHRTITAFSSQKRILGLFKDTLKGPKEE
SVRHSWLSGLGLFSSQFFNTASTALAYWYGGRLLTQGLITSEHLFQAFLVLLFTAYVIAE
AGSMTNDLSKGNSAIRSVFVILDRKTEIDPNHSWALEVKKTIKGRIELKNVFFAYPTRPD
QLIFKGLNLRIEAGRTVALAGQSGSGKSTVIGLIERFYDPTKGSVFIDAQDIKNYNLRML
RTHIALVSQEPTLFAGTIRENIAYGKENAKESEIRKAAKLANAHEFISGMKDGYDTNCGE
RGVQLSGGQKQRIALARAILKNPSILLLDEATSALDSVSEKLVQEALEKMMVSRTCVVVA
HRLSTIQKADTIAVIKNGKVAEHGSHNELLSLGRGGAYYSLIKLQGGSSPYR
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atggtttccaaagatggcatgtttcgatatgctgacaatgtcgacaagctgttaatgttt
ttcggaactttgggtagtatcggagatggattgcagtaccctcttacaatgcttgttctt
agcaaagtgatcaatgagtatggagatcccaatgccaaattgtctaatgatactgtagat
aagtatgcacttaggctgctctatgttgcgatcgtagttggactttcggcatttgtcgaa
ggggtttgttggacacgaaccgcagagagacaaacttcccgaataaggacaaaatactta
aaatctgtccttagacaggaagttggtttctttgacactcaggagactggtatctccacg
accttccaagtcgtgtcaacgatatctgcagatgccaatgcaatccaagttgcaatatgt
gataagataccgaattgccttgcatttctttcaaccttcttcttctgcctcgttgtttcc
ttcatactttcatggagaattacattagcagcgattccattgacgttgttcttcattgtt
cctgggctggtatttgggaaactgatgatggatgtgataatgaaaatgattgaatcttat
ggtgttgcaggtgggattgcagaacaagcaatttcctccataagaactgtatattcatat
gtagctgagaatcaaacaatagaaaaattcagccatgcacttgaaaggaccttggaattg
ggagtaaaccaaggttttgcaaagggattgttgatgggaagtatgggaagcatttatgta
ggatgggcttttcaagcatgggttgggacttatttggtcactgagaaaggcgaaaaaggt
ggttcagtttttgcagccggaatcaatgtcgtaatgggaggattgagtgtgttgggtgca
ctaccgaatttaactggcatcaccgaggcaaccgttgctgctactaggattttcgagatg
gttaaccgggatccttctatcgatgcagacgatagcaaaggaaaggctttgtcatatgta
agaggagagattgaatttaaggacatatattttagctatccatcaagacctgattcacct
gtcttgcaaggtttgaatcttagaatcccagccggaaagtctgtcggtcttgttggaggc
agcggttcaggcaagtccacaaccattgcattgcttcaaaggttttatgatcctaatgat
ggagaagttcttttggatggatacaaaataaggagacttcagttgaaatggttgagatct
caaatgggactagttagtcaagaacctgtactctttgcaacatccataaaagaaaatata
ctgttcgggaaagaagaagcatcgatggaagatgtaataagtgcagctaaagtggccaat
gcgcatgacttcattgtcaaattaccggaaggatacgaaactcatgttggtcagttcggg
tttcagatgtctggtggccagaagcagcgaattgccatagctagggctttgatccgggac
cctagaatcttgcttttggatgaagctacaagtgcactagatgcacaagctgaaaggata
gtgcaagaggcgatcgacaaggcatccaaagggaggacatcgatcatcattgctcaccgc
ctgatgacaataagaaatgcaaatcttattgtggttctacaagatggtagagtgattgaa
tcagggtcccataatgaactaatgcaaatgaatgatggagaaggcggagaataccaccgg
atggtagagttgcagaaaatggcattgcaaaatgaagtttctgatgactcaagttacaaa
accgaaggaagatatcaccacagggtgaatgttgcacaaagtccgatgagctatagatcg
agtgctgcgagcacgccagcattgagcccttttagccctgctctatcagtgggaacaccc
tattcctacactatccaatatgatcccgatgatgacagtattgacgaaaacttcaagcaa
gtatctcatcctactccatcacaatggcgtctgttaaaaatgaatgcgccggaatgggga
agagccttggttggaagtgtggctgcaattggctctggagcagttcaacctataaatgca
tactgtgttggcttacttatatcgatttacttccgtggaaacaaatccgaaatcaagtcg
aaatccagaactttgtcattcgttttcttaggcatagctgctcttaacttcacatccagt
ctcctccaacactacaattttgctatcatgggagagaagttaacgaaaagggtacgggag
aaatttctggagaagttgatgacttttgaggtcggttttttcgatgaagaggagaacaca
agtgcagccatttgcacaagattggctactgaagccagcatggttcgttcccttgttggg
gatcgaatgtcgttgctggttcaagccatttttgggtccatttttgcatacatagtagca
cttaaacttagctggaggttatcacttgtgatgatcgcagttcaaccgttagtcgtcgga
agcttttatgcaaggagcatgttgatgaagagtatgtctggaaaggcgcaaaaagcacag
aaggaaggaagccaactagcaagtgaagctgttgtaaaccacagaactatcactgccttt
tcatctcagaaaagaatattggggctcttcaaagacacgttaaagggtccaaaagaggaa
agtgtccgacattcgtggctttcgggtttaggcctctttagctctcaatttttcaacaca
gcttctacagcattagcttactggtatggtgggagactattgacacaagggttaataaca
tcagagcacctttttcaagctttcttggtgttgctattcactgcttatgtcattgctgaa
gctggaagcatgaccaatgatttatcgaaaggaaatagtgccattcgatcagtttttgta
atcctcgataggaaaacagagatcgatcctaatcattcatgggctctagaggttaaaaag
acgattaagggacgaatagagctcaaaaatgtgttctttgcatacccaaccagacctgac
caattgatatttaagggtttaaaccttagaattgaagcagggaggacagttgcactagcg
ggacaaagtggttctggaaaatctaccgttatcggacttattgagaggttttatgatccg
acgaaaggatcagtattcatagatgcgcaggatataaagaactataatttgagaatgctg
agaacacatattgcacttgtgagtcaggagccaaccttgtttgcaggaacgatccgcgaa
aacattgcctacgggaaagagaatgctaaagaatccgagatacgaaaggctgcaaagctt
gccaatgcacatgaatttataagtgggatgaaagatggctacgacacaaattgtggagaa
agaggtgttcaactatcagggggtcaaaaacagcggatcgcactcgcacgagccatacta
aagaacccttcaattctcctgctggatgaggccaccagtgcacttgatagtgtctcagaa
aaattggttcaagaagcacttgagaagatgatggtgagcagaacatgcgtggtggtcgct
caccggctatcgaccattcaaaaagctgatactattgccgttatcaagaacgggaaagtt
gcggaacatggttcacataatgaactactttctttaggtcgtggtggagcatattattcg
ctgataaaactacagggtgggagttctccttataggtaa
DBGET
integrated database retrieval system
