Gossypium hirsutum (upland cotton): 107897449
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Entry
107897449 CDS
T04793
Name
(RefSeq) ABC transporter B family member 19
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
107897449
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ghi02000
]
107897449
04147 Exosome [BR:
ghi04147
]
107897449
04090 CD molecules [BR:
ghi04090
]
107897449
Enzymes [BR:
ghi01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
107897449
Transporters [BR:
ghi02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
107897449
Exosome [BR:
ghi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
107897449
CD molecules [BR:
ghi04090
]
Proteins
107897449
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_21
AAA_29
AAA_22
RsgA_GTPase
AAA_16
AAA_30
Motif
Other DBs
NCBI-GeneID:
107897449
NCBI-ProteinID:
XP_016678400
UniProt:
A0A1U8IJW6
LinkDB
All DBs
Position
A10:5499509..5505981
Genome browser
AA seq
1617 aa
AA seq
DB search
MADSSFEFDFSSSLSHHQRHNTPASHYASSTVMPRRFAWGSRATPQRFHHNTPATPFATD
DDMSWQSEVSWQFEPSGWQDNRNLGAALSPWAASSASSNSRAFRRRSASEYYLSHTSRSF
VNPSYELSGHYAVPSGRLELQSYVARDNESSLHLRFGDHSRSHHDISRLATIKESSSRNA
GSPLVDEDELSSVDYYTPRAVERHIHLLETDPNRHTRADSRRSSVSQAYTGDDRDDNSIG
GHHHFHRISHQGDHEHGRSRHTRHKVDNDLDVVMQQELGGKSTSHHFLGNHQYDDMSLSM
DFSEDFITGHGHGHGQGHGLSHHGVHSDLDGHHQMRHKLEGLDHNLHSATHQFGGHHKYD
DFDLPPNFKEDDYEEEEDVEPPKPASLFSLFKYSTKWDMVLVFLGCLGALINGGSLPWYS
FLFGKFVNKIAQESLKGELTQMMKDVDMICKFMSCLAAVVVVGAYLEITCWRLVGERSAQ
RIRTKYLRAVLRQDISFFDTEVSTGDIMHGISSDVAQIQEVMGEKMAHFIHHVFTFICGY
IVGFLASWKVSLVVFAVTPLMMFCGIAYKAIYGGLTAKEEVSYRKAGTIAEQAISSIRTV
FSFVGEDNLAARYGELLANSVPLGAKIGFAKGAGIGVIYLVTYSTWALAFWYGSILVARK
EISGGDAIACFFGVNVGGRGLALALTYFAQFAQGTVAAGRVFDIIDRVPEIDPYNPEGRM
LSSVRGKIEFKGVTFAYPSRPDTTILSSLNLVIRSAKTLALVGASGGGKSTIFALIERFY
DPDKGTVTLDGYDLKTLQVKWLRRQIGMVGQEPVLFATTILENVMMGKENATKKEAVAAC
VAANAHGFIYDLPLGYDTQVGAKGTQLSGGQKQRIALARALIKDPGILLLDEPTSALDSE
AEAVVQQAIDKISKGRTTVVIAHRLATVRNANTIVVLDNGSVSESGSHHQLMEREGAYYK
LVKLASEAVSNPELNETNTQKGMEFSTYDKSAYEASRSLYAYDISKSKYVKSIQVVNQVE
EEMQQKQKPREYQISKIWTLQRPELITLLLGFLFGIHAGAILSIFPLFLGIALQAYFDDT
PKALKAEVNKLALALVGLGFGSIIFLTGQQGFCGWAGTKLTVRVRDLLFRSILKQEPGWF
DFEDNATGILVSRLSIDCLSFRLVLGDRYSVLLMGVSAAAVGLGISFYLEWRLALVAAAV
TPFTLGASYLNLIINIGPRLDNKAYDKASTIASGAISNIRTVATFYSQEEIVKSFDQALS
DPRKQSVKRSQILGFALGLSQGAMYCAYTLTLWVGASLIKQRITGFGEVYKIFLILVLSS
FSVGQLAGLSPDTTMAATAIPAVFDIINRKPLIGNSRDKGKKIERSKPLDIELKMVTFAY
PSRQQVIVLRDFCLKVKGGSMVALVGGSGSGKSTVIWLVQRFYDPNQGKVMMGGIDLKEL
NLKWLRKQVALVGQEPALFAGSIRENIAFGNPNATWGEIEEAAKEAYIHKFISGLPQGYE
TQVGESGVQLSGGQKQRIAIARAILKKSKVLLLDEASSALDLESEKHIQDALRRVSRSAT
AIIVAHRLSTIREANTIAVVKDGAVVEYGSHDKLLTSHVDGVYASLVRAEREANAFS
NT seq
4854 nt
NT seq
+upstream
nt +downstream
nt
atggccgattcctctttcgaattcgacttctcttcttcgttaagccaccatcaacgccat
aacacgccagcttcacactatgcctcaagtactgtcatgccacgccgctttgcttggggg
tcccgtgccactccacagaggttccatcacaacactcctgcaacgccttttgccacggac
gatgatatgtcatggcaaagtgaagtttcatggcagtttgagccttctggttggcaagac
aaccggaatttgggcgcagcccttagtccttgggcagcatccagtgcatcatcaaatagt
cgggcatttcgtcgacgctcagctagtgaatattatctttctcacacttctagaagcttt
gtgaatccgagctacgagctttcaggtcattatgctgtgccttcagggcggcttgagctt
caaagctacgttgctagagataatgaaagttcattacatctccgtttcggagaccatagt
aggtctcatcacgatatttcaagactggctactattaaagaaagcagcagtagaaatgct
ggaagccctttagttgacgaagatgagcttagctctgtagattattacactccacgagct
gttgagaggcatatacacctgctagagactgatccgaaccgtcatacaagagctgattca
cgtaggtcttcagtttcacaggcttatacgggtgatgaccgggatgacaattctattgga
gggcatcatcattttcatagaatatcgcaccagggtgatcatgagcacggtaggagccgt
cacacgaggcacaaggtggataatgatcttgatgtagtaatgcagcaggagcttggtggg
aaatcaactagtcatcattttcttggtaatcatcagtacgatgacatgagcctgtcgatg
gatttcagtgaagattttattacagggcatgggcatggtcatggtcaaggtcatgggtta
tcacatcacggtgttcatagtgatcttgatggtcatcatcagatgagacacaagttggaa
ggtcttgaccataacttgcactcagctacccatcaattcggtggccatcataagtacgat
gattttgatctgcccccaaatttcaaagaagatgactatgaggaggaagaggatgtagaa
ccaccaaagccagccagtttgtttagtttgttcaagtattcaacaaaatgggatatggta
ctagtgtttttaggttgtttgggagccttaatcaatggaggttcacttccttggtattct
tttctttttggtaagtttgtcaataagattgcacaagaatcattgaaaggtgaactgacc
cagatgatgaaggatgttgacatgatatgtaaatttatgtcttgcttggcagctgtagtg
gtggttggagcatacttagaaattacatgctggaggctggttggggaacgttcagctcaa
cgaattagaacaaaatatttgagagcagttctgagacaggacatcagctttttcgatacg
gaagttagcaccggtgacattatgcatggtatttcaagtgatgttgctcaaatacaggaa
gttatgggagagaagatggcacattttattcaccatgtattcaccttcatatgtggttat
atagttgggtttttggcatcatggaaagtgtcacttgtagtttttgctgttaccccacta
atgatgttttgcggtattgcttacaaggctatttatggtggtctcacggcaaaggaagag
gtttcttacaggaaagctggtaccattgcagagcaagcaattagttcaattcgaactgta
ttttcttttgttggtgaggataatttggcagcaagatatggtgaattattggcaaattca
gtgcctcttggggcaaagatcgggtttgccaagggtgcgggaataggggttatctattta
gtcacatactcaacatgggcattggctttttggtatggttcaatcttggttgctaggaag
gagatctctggtggtgatgccattgcttgcttctttggtgtcaatgtagggggaaggggc
ttggcattagcactgacatattttgctcaattcgctcaaggcacagtagcagcggggcga
gtatttgatatcatagacagggttccagagatagacccttataatcccgagggaaggatg
ttatcgagtgttcggggaaagatcgagtttaaaggtgtaacattcgcttatccatctcgt
cctgacactacaattctcagttctctcaatttagtcattcgatcagcaaagactcttgca
ttggttggagcaagtggaggtggcaagtccaccatctttgctctcattgagaggttctat
gatcctgacaaaggaactgtaaccttggatggctatgatttaaagacactacaagtaaag
tggctaagaaggcagattggtatggttgggcaagaaccagttctgtttgccaccaccata
ttggaaaatgtgatgatgggtaaagaaaatgccaccaagaaagaagctgttgcagcttgt
gttgctgccaatgcacatggtttcatttatgaccttccactaggatatgatactcaggtt
ggagctaagggaactcagttatcaggtggccaaaagcagagaattgctctggctcgtgca
ttgattaaagaccctggaatccttctcttagatgagcccaccagtgccttggattccgaa
gccgaggcagttgtacaacaagcaattgacaagatttctaaaggaagaacaacagtggtc
attgctcacaggctagcaacagtaagaaatgccaacaccattgttgttcttgataatgga
tcagtttctgagtctggtagccatcaccagctaatggaaagagaaggggcctattataaa
cttgtcaaacttgcttctgaagcagtttcaaaccctgaactgaatgagacaaatactcaa
aagggaatggaattttccacatatgataaatcagcctatgaagcatcaagatcactatat
gcatacgatatttcgaaatcaaagtacgtaaagtccatccaagtagttaaccaagtggaa
gaggaaatgcaacaaaagcaaaagcctagagaataccaaatttcgaagatatggactcta
caaagaccagagctcatcacgcttttactaggttttctttttggtatccatgcaggtgct
attctctccatattccccttgtttttaggcattgctcttcaagcttactttgatgacact
ccaaaagcattgaaggcagaagttaacaagctcgccttagctcttgttggcctaggcttt
ggttctataattttcttaactggacaacagggtttttgtggttgggctggaacaaagctg
acagtaagggtgagagacctcttattccgctcgatactaaaacaagaacctggttggttc
gattttgaggacaatgccactggtatccttgtttcaagactctcaattgattgtctcagc
tttcgattggtcctcggggatcggtactcggtcttgttgatgggtgtgagtgcagctgca
gtggggcttggtatctcgttttacctcgaatggaggttagccctcgtggctgctgctgtt
actcctttcactcttggtgcaagctacttgaacttaattataaacattggaccaaggtta
gataataaagcatatgacaaagctagcaccattgcttctggtgcaatttcgaacataagg
acggtggctacattttattctcaagaagagatagttaaatcctttgatcaagctttatct
gatcctaggaaacaatcagtgaaaaggtcacaaattctaggcttcgcacttggtctttct
caaggtgccatgtattgtgcatacactttaacactctgggttggtgcctcccttattaaa
cagcgcattacaggctttggtgaagtatataaaatctttctcattcttgtgttaagctca
ttttcagttggacaactagcaggcctctcaccagacaccaccatggctgcgacagcgatc
cctgctgtgtttgatatcatcaaccgaaagccgctgattggtaattcccgagataaaggt
aaaaagatcgaacgttcgaagccattggatatcgaattgaaaatggttacatttgcatat
ccatctaggcaacaagtgattgtgttgagggacttttgtttaaaggtgaagggtggtagc
atggtagcattggtaggtggaagtgggtcagggaaatcaacggtcatatggttggtacaa
aggttttatgatccaaatcaagggaaagtaatgatgggaggcatagatttgaaggagctc
aacttgaaatggttaagaaaacaagtagccttggtgggtcaagagcctgctctgtttgct
ggaagtataagggaaaacattgctttcgggaacccaaatgccacatggggtgagattgaa
gaggctgcgaaggaagcttacatccacaagttcatcagtggtctcccccaaggctatgaa
actcaggttggggagagtggggttcagctatcaggcggtcaaaaacaaaggattgcaata
gcaagagccatacttaagaaatcaaaggtgctgcttttagatgaagcaagcagtgctctg
gatttggaatcagagaagcatatccaggatgcactaagaagggtttcccgaagtgccact
gcaattatagtagcacataggctttccactatcagggaagccaataccatagctgttgtg
aaagatggtgcagttgtggagtatggcagccatgataagcttttaacttcccatgttgat
ggtgtttatgctagcttagttcgggctgaaagagaagccaatgccttttcttga
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integrated database retrieval system
