Gossypium hirsutum (upland cotton): 107898339
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Entry
107898339 CDS
T04793
Name
(RefSeq) DNA-3-methyladenine glycosylase 1-like
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
107898339
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ghi03400
]
107898339
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
107898339
DNA repair and recombination proteins [BR:
ghi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
107898339
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
CCDC71L
Motif
Other DBs
NCBI-GeneID:
107898339
NCBI-ProteinID:
XP_016679340
UniProt:
A0A1U8IMF9
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Position
D04:57962054..57966138
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AA seq
330 aa
AA seq
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MFSTQMKNKEISMFFSNMSKANVRKHVMEKKGKEKPMESPVPSKNLKKIYPIGFQRSSSS
LSLSSLSLSLSQNSNDSTITDHSSTTPLEQRISLALSLIAPHHERRAFVPIVKNLRQTQQ
PKQQQEHPNNGELRRCHWITKNSDKAYISFHDEQWGVPVYDDKQLFELLALSGMLMDYNW
TEILKKKELYREAFAGFDPEIVAKMGDKEINEISSNKAIMLVESRVRCIIHNAKCIQKIV
REQGSFSSFMWGYVNHQPQINKYKYPRNVPLRTPKAEAISKDLLKRGFRFVGPVIVYSFM
QAAGLTIDHLIGCFRHKECVALAERPWRHI
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgtttagtacacaaatgaaaaacaaagagatctccatgtttttctccaacatgtctaaa
gccaatgttaggaaacatgttatggagaagaaaggaaaagaaaagccaatggaaagtccg
gtaccgtcgaagaacttgaagaaaatctaccctatcgggtttcaacgaagtagctcgtct
ttgtcgttgtcgtcgttgtcgttgtctttgtcgcagaactcgaatgattcaacgattaca
gatcattcgagtactacaccgttggagcaaaggatttcgttagctcttagcttgatcgcg
cctcatcatgagcggagagccttcgtcccgattgttaaaaatctacgacaaactcagcaa
ccaaaacaacaacaagaacatcctaacaatggggaacttaggagatgccattggattaca
aagaacagtgataaagcgtacatatcatttcatgatgaacaatggggagttccagtttat
gatgacaagcaattattcgaactgcttgccttgtccggtatgttgatggattacaattgg
accgaaattttgaaaaaaaaagaactttatagagaagcttttgctgggtttgatcctgaa
attgttgcaaaaatgggggataaagaaatcaatgagatatcatcaaacaaagctattatg
ttggttgagagcagagtaaggtgcataatacacaatgccaaatgcatacaaaagattgtg
agagaacagggatcttttagtagcttcatgtggggttatgtgaatcatcaaccacaaatt
aacaaatacaagtacccaagaaatgttcctcttagaaccccaaaagctgaagccattagc
aaggacctattgaagcgaggattccgattcgttgggccagtcatcgtttattcattcatg
caagctgccgggttgactatcgatcatcttatcggatgttttagacacaaagaatgtgtt
gcccttgccgagcgaccttggagacacatttaa
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