Gossypium hirsutum (upland cotton): 107901170
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Entry
107901170 CDS
T04793
Name
(RefSeq) putative ABC transporter B family member 8
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
107901170
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ghi02000
]
107901170
04147 Exosome [BR:
ghi04147
]
107901170
04090 CD molecules [BR:
ghi04090
]
107901170
Enzymes [BR:
ghi01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
107901170
Transporters [BR:
ghi02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
107901170
Exosome [BR:
ghi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
107901170
CD molecules [BR:
ghi04090
]
Proteins
107901170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_22
ABC_ATPase
Zeta_toxin
AAA_29
RsgA_GTPase
AAA_21
AAA_30
Motif
Other DBs
NCBI-GeneID:
107901170
NCBI-ProteinID:
XP_016682554
UniProt:
A0A1U8J2W7
LinkDB
All DBs
Position
D06:complement(12102853..12108990)
Genome browser
AA seq
1244 aa
AA seq
DB search
MGSAEKTELEKNEFPRERERRHNICIIFRYADWVDILLMVLGTIGAIGDGMSTNWLILFV
SRIMNSLGYGSNSQQNNNNFMGEVEKCTLYFTYLGLGSMVVAFMEGYCWSKTSERQVLKI
RYKYFEAILRQEVGFFDSQEATTSEVINSISKDTSLIQEVLSEKVPLFVMNTTAFFSGLA
FSAYLSWRLALVVFPTILLLIIPGILYGKYLLYISKKASKEYGKANTIVEQALSSIKTVY
SFTAERRIVERYTAILDRAVKLGLKQGIAKGLAVGSTGISFAIWAFVAWYGSHLVMYKGE
SGGRVYTAGLCFILGGLALGVALADLKYFTEATVAAASIFSRIDRTPLIQSEDTKGIVLD
TIRGDIEFDNVNFVYPSRSDSLVLKHFNLKVEAGKTVALVGASGSGKSTAIALVQRFYDA
NDGVVKIDGVDIRTLQLKWIRGKMGLVSQEHALFGTSIKENITFGRLDATMDEVMTAAMA
ANAHNFIRQLPQGYETKIGERGALLSGGQKQRIAIARAIIKNPVILLLDEATSALDSESE
TLVQNALDQASMGRTTLVVAHKLSTIRNADLIAVVNNGSIIEMGSHNDLINMKDGHYAQL
AKLQRQFSCDDHEQNPETRLPSAGRMSGGRLSTAKSSPSPSPSFFATPLPNIESPKPVSH
PPPSFRRLLSLNSPEWKHGLMGSLSAIVFGAVQPVYALTIGGMISAFFAKSHQEMQARIR
TYAFIFSLLTLLSVILNLIQHYNFAYMGERLTRRIRSRMLEKILSFEAAWFDEEKNSTGA
LCSSLSNQASMVKTLVADRISLLVQTTSAVTIAMIIGLVVAWKLAIVMIAVQPLAIMCFY
TRKVLLSSISTNFVKAQNQSTQIAVEAVYNHRIVTSFGSLGKVLQLFDEAQEEPRKEARK
ISWLAGIGMGSAQSLTFMSWALDFWYGGTLVQKGEISAGDVFKTFFILVSTGKVIAEAGS
MTSDLAKGSTAVASVFEILDRQSSITPGSQGDGTNGIKLERMSGKIELKKVDFAYPSRPE
TLVLRQFSLEVKPGRSVGLVGKSGCGKSTVVGLIQRFYDVEMGSVRVDGIDIRGLDVQWY
RRQMALVSQEPVIFSGTIRDNIVFGKLDASENEVVEAARAANAHEFISALKEGYETECGE
RGVQLSGGQKQRIAIARAIIRNPKILLLDEATSALDVQSEQVVQEALDQIMVGRTTVVIA
HRLNTIKKVDSIAFVADGKVVEQGTCAQLKNQHGAFSKLASLQK
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atgggttctgcagagaagactgagttagagaaaaatgagttcccaagggagagggaaaga
aggcataacatatgcataattttcagatatgctgattgggtcgatattctgctaatggta
ttgggtaccattggagctattggcgatggaatgtcgaccaactggttgatactctttgtg
agtcgcataatgaacagcttgggttatggtagtaattcccaacaaaataataacaatttc
atgggagaggtcgaaaagtgcaccttatactttacatacttgggactaggaagcatggtg
gtggctttcatggaagggtactgttggagcaaaaccagcgagcggcaagtgctgaagatt
cgttacaagtatttcgaagcaattcttagacaagaagttgggttttttgactcacaggag
gctaccacttcagaagtcatcaacagcatatctaaagatacatctctcatacaagaagtc
cttagtgaaaaggttccattatttgtgatgaatacaacagccttcttctcaggcctggca
ttttcagcatatctttcatggaggttggctctagtagttttcccaacaatactattgctg
ataattccaggaatactttatggaaagtaccttttgtatatctccaagaaagcttccaag
gagtatggaaaggcaaacaccatagtggagcaggcactaagctccattaaaacggtgtat
tccttcacagcagaaaggagaatcgtggagagatatacagcaatattggatagggcggtg
aagttgggattgaagcaagggatagccaaagggttggcagtggggagcacagggatttct
tttgcaatatgggctttcgttgcttggtatggaagtcatttggtaatgtacaaaggagaa
agtggaggaagagtttatacggctggtctctgctttatattgggtggcctggcactcgga
gtagcactggctgatctcaagtacttcacggaagccacggttgccgctgcaagcatcttc
tctaggatcgaccgtactcccctaatccagagcgaggataccaaaggcatcgtgttagac
acaatccgaggagacatagagttcgacaacgtcaatttcgtatacccttctcgctccgat
tccctcgttctcaaacatttcaacctcaaagttgaagcaggcaaaaccgtggcacttgta
ggtgccagtggaagcggcaaatccaccgccattgctttggtgcaacgtttttatgatgcc
aacgatggggtagtgaagatcgatggtgttgatataagaacactgcaattgaaatggatc
agaggtaaaatggggcttgttagtcaagaacatgccttgtttgggacttccatcaaggaa
aatataacgttcgggaggctagatgctaccatggatgaagtaatgaccgctgccatggct
gctaatgctcataattttataagacagcttcctcaaggctatgaaaccaagataggggaa
cgaggagcactgttgtcaggaggacaaaagcagcgaatcgcgattgctagagccattatc
aagaaccctgtgatactgctacttgatgaggcaacgagtgcccttgattctgaatcagaa
acactagtccaaaatgcacttgatcaggcctccatgggaagaaccaccctagttgttgcc
cacaagctctccactattcgaaatgcagacctcattgcagttgttaacaatggtagtatc
atagaaatgggatcccacaacgatctcataaacatgaaggacggccactatgcacaactt
gcaaagctgcaaagacaattcagctgcgatgaccatgaacaaaatccagaaacacgcctt
ccatctgcaggaagaatgagtggcggcaggctaagcactgccaaatcaagcccaagccca
agccccagtttcttcgctacgccgttgcctaatatcgaaagtccgaaaccagtatctcat
ccccctccttccttccgtaggcttctctctctaaattccccagaatggaagcatggtttg
atgggtagcctctcggctatagtttttggagctgttcaacctgtttatgctttaaccatt
ggtggaatgatttcagccttttttgcaaaaagtcaccaagaaatgcaggctcgaatacgc
acttacgctttcatattttctttgctcaccttgctctctgtcattctcaatcttattcag
cattataattttgcttacatgggcgagcggttaaccaggagaatccgaagtcgaatgctg
gaaaaaatattgtccttcgaagccgcttggtttgatgaagaaaaaaactctactggagct
ttatgctcgagtttgagcaatcaggcttcgatggttaagacactagtcgcagaccgaatc
tcattgttagttcaaaccacttctgctgttaccatcgcaatgattatcgggctagtcgtg
gcttggaagttagcaatagtgatgattgcagtccaacctctcgcaattatgtgtttctac
acacgaaaagttttgctttctagcatttcaactaatttcgtcaaggcacaaaatcaaagt
actcaaatagcagtggaagctgtgtataatcatagaattgtaacctcatttgggagccta
ggtaaggttcttcaacttttcgatgaggctcaagaggaaccaaggaaagaggctaggaaa
atatcatggctagcggggattggtatggggtcagctcaaagcctaacatttatgtcatgg
gctttagatttttggtatggaggtacattggttcaaaagggagagatatcagcaggggat
gtgtttaagacattctttatcttggtgagcaccggaaaggtcatagccgaagctggaagt
atgacctccgatctagccaagggctcaactgcagtggcatctgtgtttgagatccttgat
cggcaatcctccattactccagggtctcaaggagatggcaccaatggaataaagctagaa
agaatgagtggaaagatagagctgaaaaaggttgattttgcatatccaagccggccggag
acgctagtgttgcgtcaatttagcttggaggtgaaaccaggcagaagcgttggactagtt
gggaaaagtggatgcgggaaatcaacggtggttggattaatccaaagattttatgatgtt
gaaatggggtcagtgagagtggatggtatcgacataagaggactagacgttcaatggtac
aggaggcaaatggcactggtcagccaagagccagttatattttcaggcaccatccgggac
aacattgtgttcggaaagctcgacgcatcagagaatgaagttgtggaagcagctagagca
gcaaatgctcatgaattcatctcggcactgaaggaaggatacgaaacagaatgcggagaa
agaggagtgcaattatcaggaggacagaaacaaagaatagctatagctagagctataatt
aggaacccgaaaatacttttactagacgaggcgactagcgctctcgatgtgcaatctgaa
caagttgttcaagaagcattagatcaaatcatggtgggaaggaccacagtggtgatagct
catcgacttaacacaataaaaaaggttgattcaattgcatttgtggccgatgggaaggtt
gtggagcaaggtacctgtgctcagctcaagaaccagcacggagcattttccaagcttgca
agccttcaaaaataa
DBGET
integrated database retrieval system
