Gossypium hirsutum (upland cotton): 107903330
Help
Entry
107903330 CDS
T04793
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 32
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ghi03009
]
107903330
Enzymes [BR:
ghi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107903330
Ribosome biogenesis [BR:
ghi03009
]
Eukaryotic type
90S particles
Helicases
107903330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Motif
Other DBs
NCBI-GeneID:
107903330
NCBI-ProteinID:
XP_040948390
LinkDB
All DBs
Position
D05:complement(63478115..63482712)
Genome browser
AA seq
753 aa
AA seq
DB search
MRRPKSRAVRKQQKNNELQEIENLNEWIESQKPESGTNPLSLDPLKSKSPIGRIVDPESG
AVSFSRYAGARKFYELPLSKRTKNGLEGGGFKKMTDIQVASLPHALCGRDILGAAKTGSG
KTLAFVIPVLEKLHRERWGPEDGVGSIIISPTRELAGQLFDVLKTVGTHHNFSAGLLIGG
RKEVDSEKERVNELNILVCTPGRLLQHMDETPNFDCSQLQVLVLDEADRILDIGFKKTLN
AIVSQLPKRRQTLLFSATQTKSVQDLARLSLKDPEYISVHEKAVTATPSRLQQTAMIVPL
EQKLDMLWSFIKAHLRSKILVFLSSCKEVKFVFEAFKKLRPGIPLKCLHGRMNQEKRLGI
YSQFCESQSVLFSTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYLSGGRSVL
FLTPSEMKMLEKLQAAKVPIQFIKANTKRLQPVSGLLSALLVKYPDMQQLAQRAFITYLR
SIYIQKDKEVFDVTKLPIDEYSASLGLPMTPKVKFLNQKEKRETKSEKSSLIEPKIYDEE
NESVIPKEELLVEDVKDNRGDKDFLLKDDAPDVEGNTSEIGDIVSATRVLKKKKLKINVH
RPVGTRVVFDEEGNTQAPLAMLADKTSGDILLDQDKKNDFYKKMREELKQVDKEDKLLER
QRLREKRIKKKMKLKKGQREEEDGEEEEDDLSGSEGEPDANRKRKRSKIYFHSDSDDGEK
EEDKAGSASIKAESISLAEQEELALKLLNSMHS
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgcgaagaccgaaatcgagagctgtccgaaaacaacagaagaacaatgagctccaagaa
atagagaatctgaacgaatggatagaatcccagaaacccgaatccggtaccaatcctttg
tcactagacccgctcaaatccaagtcgccaatcggccgaattgtcgaccctgaaagtggc
gccgtttcattctcgaggtacgcgggagcgaggaaattttatgagctgccgttatcaaag
aggacgaagaatgggttggagggaggtgggtttaagaagatgacggatatacaggtggcg
tctttgcctcacgcgctttgtggaagagatattctcggtgccgctaaaactgggtccgga
aagactcttgcttttgttattccggtcctggagaagctgcatagagagagatggggtcct
gaggatggagtaggcagcatcataatatctcccacaagggaactagctggtcagcttttt
gatgtattaaaaactgttgggacgcatcataattttagtgctggccttctaattggtgga
cgaaaggaagttgacagtgagaaagagcgggtgaatgagctgaatattctagtttgtact
cctggacgtcttcttcagcatatggatgagactccaaattttgattgttctcagcttcag
gttttggtccttgatgaggctgatcgtattctcgacattggttttaagaagaccttaaat
gcaattgtatcacagttaccaaagcgtagacaaacattgcttttctcagcaacgcaaaca
aagtctgttcaggatcttgctaggcttagcttgaaagatccagagtatattagtgtgcac
gagaaagctgtgacggccactcctagtcgcttgcagcaaactgctatgattgttcctctt
gaacaaaagttggacatgttgtggagtttcataaaggcacatcttagatcaaagatcctt
gtgtttctttcaagctgcaaagaggttaaatttgtctttgaagccttcaagaaactgcgt
cctggaatacccttgaaatgtcttcatggaaggatgaaccaagagaagaggctgggtata
tattcccaattctgcgagtctcaatcagttctcttctcaaccgatgtggcctccagaggc
cttgattttaacaaggccgttgactgggttgtgcaggtagattgtcccgaagatgttgca
tcctatatacaccgagttggccgcactgctcgttatctttccggaggaaggtcggtttta
tttttgacgccttcagaaatgaagatgcttgaaaagttacaggcagcaaaagtacctata
cagtttattaaggcaaatacaaagaggttacaaccagtttctggattattgtcggcttta
ctagttaaatatccagacatgcagcagctggcacagagggcctttatcacatatctgcgt
tctatttatattcaaaaagataaagaggtttttgatgtcacgaaattgcctattgacgaa
tattcagcatcacttggtttgccaatgacccccaaagtcaagttcttgaatcaaaaagag
aaaagagaaaccaagtcagaaaaatcttctctcattgaaccaaaaatatatgatgaagaa
aatgagtcagttattccaaaggaagagctacttgttgaagatgtcaaagacaacagaggg
gacaaagattttcttttgaaggatgatgcaccagatgttgaaggaaatactagcgaaatc
ggagatatcgtgtcagcaacacgggtcttgaagaaaaaaaagctgaagatcaatgttcat
aggcctgtggggacaagggttgtctttgatgaggaaggcaacacacaagctccacttgct
atgttggctgacaagacaagtggcgatatactgcttgaccaagacaaaaagaatgatttc
tacaagaaaatgagggaagagctgaagcaggtggacaaggaagacaaacttctagagcgg
caacggcttagggagaaacggatcaagaagaagatgaagttgaagaaagggcaaagggaa
gaagaggatggtgaagaggaggaggatgatctttcaggttcagaaggagaaccggatgcg
aacagaaaacggaaaagatcgaaaatatactttcatagtgatagcgatgacggtgaaaag
gaagaagataaggctggatcggcgagtatcaaggccgaatccatttctctggcagaacaa
gaagaacttgctcttaagttattaaactcaatgcactcgtaa
DBGET
integrated database retrieval system
