Gossypium hirsutum (upland cotton): 107904549
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Entry
107904549 CDS
T04793
Name
(RefSeq) serine/arginine-rich splicing factor SR34A isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107904549
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ghi03041
]
107904549
Spliceosome [BR:
ghi03041
]
Common components
Common spliceosomal components
SR proteins
107904549
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
RRM_3
Transformer
Transposase_mut
Motif
Other DBs
NCBI-GeneID:
107904549
NCBI-ProteinID:
XP_016686446
UniProt:
A0A1U8J7X5
LinkDB
All DBs
Position
D11:1371032..1375097
Genome browser
AA seq
257 aa
AA seq
DB search
MSGRFSRTIYVGNLPSDIREWEVEDLFYKYGRILDIELKIPLRPPCFCFVEFEDPRDAED
AIRGRDGYNFDGCRLRVELAHGGRGQSSSDRRGGYGGAAAKFGVSRHSDYRVIVRGLPSS
ASWQDLKDHMRKAGDVCFAEISRDSDGTFGIVDFTNYDDMKYAISKLDDTEFRNPWARAY
IQVRRYESSPSRSRSRSGSRNRSRSLSVKRDRSKSRERPASNSPVKARSVSPVKSSRARS
RSRSRSGSPDKAGSVSH
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtcgcttctctcgcactatctatgtcggcaacctaccctctgatattagagaa
tgggaggttgaagatctattctacaagtatggtcgtattttggatattgaattgaagatt
ccgctccgccctccatgtttttgttttgttgagtttgaggatccccgggatgctgaagat
gcaatcagaggtcgagatggttataactttgatggttgtcgtttgagggttgagcttgca
catggtggtagaggacaatcctcaagtgatcgtcgaggcgggtatggtggcgctgcggct
aagtttggtgtatcacgtcattctgattatcgagttatcgttcgtgggctcccttcttct
gcttcctggcaagatttgaaggatcacatgcgaaaagctggtgatgtgtgttttgcggaa
atttcacgtgacagtgatgggacctttggtatagttgattttaccaattatgatgacatg
aaatatgctatcagtaaacttgatgatactgagtttagaaatccttgggcaagagcttat
attcaggtgaggagatacgagagcagcccctccaggagtagaagtagaagcggaagcaga
aaccgtagcagaagcctcagcgttaaaagagaccggagtaaatcacgggaaagacctgca
tccaactcaccagttaaagcaagatctgtctctcctgttaagtcatctagagcaagatcg
aggtcaaggtcaaggtcaggatcacctgacaaggccggatcagttagccattga
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