Gossypium hirsutum (upland cotton): 107906421
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Entry
107906421 CDS
T04793
Name
(RefSeq) probable GMP synthase [glutamine-hydrolyzing]
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
107906421
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ghi03400
]
107906421
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
107906421
DNA repair and recombination proteins [BR:
ghi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
107906421
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
Peptidase_S77
Motif
Other DBs
NCBI-GeneID:
107906421
NCBI-ProteinID:
XP_016688891
UniProt:
A0A1U8JF74
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Position
D05:10272693..10277950
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AA seq
379 aa
AA seq
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MSGPPRVRSANTATEMEARSVLGPAGNKVPTKPAPKSTKKPVQQTPEGKDKEKVKELVTP
QKKPTPASQSLTLTASILRQQERKAGNFSMSLSCLSNGGASSSSAGSSSSGMTGGGGRRG
GKHGIGVGVRRKQSGPKGESEVIVVDSGEGGCLDNKKRCGWVTTNSDLCYVAFHDEEWGV
PVNDDKKLFELLSLSGALAELTWPTILSKGHLFRDTFLEFDPRAVSKLSEKKIGAPGGPA
SSLLSELKIRGIIENARQICKVIDEFGSFDKYIWSFVNHKPIVGQFRYPRQVPVKSPKSE
VISKDLIRRGFRSVGPTVVYSFMQVAGLTNDHLMSCFRFQECITGVESRGKVNNDEANDE
TRKVEETTALGYLAWTRGF
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggaccgccaagggtaaggtcggctaacactgcaacggaaatggaagcgaggtcg
gttctgggtccggctgggaacaaggtcccgacaaaaccggcaccaaaatcgaccaaaaaa
ccggtccagcaaacacctgagggaaaagacaaagagaaggttaaagaactggtaactcca
caaaagaaaccaacgccggcttctcaatcgttgactttgactgcatcgattttgaggcag
caggaaaggaaggcggggaatttttcgatgagtctgtcgtgcttgtcgaacggaggagca
tcgtcttcatcggctgggtcgtcgtcgagtgggatgactggcggaggagggcggcggggt
ggtaaacatggaatcggtgttggagtgaggaggaagcaaagtgggccgaaaggggagagt
gaggtgattgtggtggattcaggggaaggtggttgcttggataacaagaaaagatgtgga
tgggtcacaaccaattcggatctttgttatgtcgcttttcatgatgaagaatggggagtt
ccagttaatgatgacaagaaactgtttgaattgctcagcttatcaggtgctttggctgaa
ctgacatggcctaccatccttagcaaaggacatttgtttagggacacctttctggagttt
gatcccagggctgtttctaaactaagtgagaaaaagataggagctcctggaggccctgcc
agctctctgctatcagaactcaagattcgaggcatcattgaaaatgcacgccaaatatgc
aaggtaatagatgagtttgggtcatttgacaagtacatttggagcttcgtgaatcacaag
ccaatagttggtcaatttcggtaccctcggcaggttccagtcaagagtccaaaatcagag
gtgataagcaaagacctgatcagaagaggattccgaagcgtggggccgacagttgtatat
tcattcatgcaagtggctggattgactaatgaccatcttatgagttgctttaggtttcaa
gaatgcataacaggggtggaatcaaggggaaaagttaacaatgatgaagcaaatgatgaa
actagaaaagttgaggagacgactgccttgggataccttgcctggactcggggtttctaa
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