Gossypium hirsutum (upland cotton): 107907770
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Entry
107907770 CDS
T04793
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107907770
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ghi01009
]
107907770
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107907770
03036 Chromosome and associated proteins [BR:
ghi03036
]
107907770
Protein phosphatases and associated proteins [BR:
ghi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
107907770
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
107907770
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
107907770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
Vac14_Fab1_bd
PDS5
Htt_N-HEAT_1
HEAT_EZ
Adaptin_N
CLASP_N
Cnd1
Motif
Other DBs
NCBI-GeneID:
107907770
NCBI-ProteinID:
XP_016690609
UniProt:
A0A1U8JQR2
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All DBs
Position
A08:complement(57005965..57015648)
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AA seq
586 aa
AA seq
DB search
MAMIDEPLYPIAVLIDELKNEDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDD
DEVLLAMAEELGVFIPYVGGVQYANVLLPPLETLCTVEETCVREKAVESLCRIGAQMMEQ
DLVESFIPLVKRLAAGEWFTARVSSCGLFHIAYPSAPEALKTELRAIYSQLCQDDMPMVR
RSAATNLGNFAATVEAPHLKVDIMSMFDDLTQDDQDSVRLLAVEGCAALGKLLEPQDCAA
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRSDLVPAYVRLLRDNEAEVRIAA
AGKVTKFCRILNPELAIQHILPCVKELSTDSSQHVRSALASVIMGMAPVLGKDATIEQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGALCMQWLKDKVYSIRDAAANNVKRLAEEFGPDWAMQHIVPQV
LDMINNPHYLHRMTILHSISLLAPVMGSDITCSKLLPVVINASKDRVPNIKFNVAKVLQS
LIPIVDQSVVEKKIRPCLVELSEDSDVDVRFFASQALESSNQVMMS
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgattgatgagccgttgtatcccattgctgtgttgattgatgagctcaagaat
gaagatatccagcttcgtttgaactctatccgcagactctctacgattgcacgtgcactt
ggtgaagaaaggacacggaaagagttgattccatttctgagtgagaacaatgatgatgat
gatgaagttctccttgccatggcggaagaacttggagtttttattccttatgttggaggt
gtgcaatatgctaatgtattgttacctccattggagactctatgcactgttgaggaaact
tgtgtcagggagaaggctgtggaatcattgtgtagaattggtgcccagatgatggagcag
gacttggttgagtcctttattccattagtgaagagattggctgctggtgagtggtttacg
gctcgagtttcctcgtgtggcttgtttcatattgcatacccaagtgccccggaggcatta
aaaactgaactgagagcgatatacagtcagctttgtcaagatgatatgcccatggttagg
agatctgctgcaacaaatcttggaaattttgctgctactgtagaagcacctcatttgaag
gtggacatcatgtcaatgtttgatgatctgacacaggatgaccaagattctgttcgatta
ttggctgttgagggttgtgcagctcttggaaagttgttggaaccccaagactgtgcagca
catattctccctgtcatagttaatttctcacaggataagtcttggcgtgtccgttacatg
gttgctaatcaattgtatgagctatgtgaagcggttggtcctgagcctactaggtcggat
ctagttcctgcatatgttcgcctgcttcgtgataatgaagctgaagtccgaatagctgct
gcgggaaaagtaaccaagttttgccgaattctgaacccggaattagcaattcagcatatt
cttccttgtgtcaaggaactatcaacagattcatcccagcatgttcgttctgctttagct
tcagttataatgggaatggcacctgttttagggaaggatgcgaccatagagcaattgctt
cccatatttctttctcttttgaaagatgaatttccagatgttcgactgaatatcattagc
aagcttgatcaagtgaaccaggtgattggaattgatctgctgtcccagtccctattgcca
gcaattgtggagcttgcagaggataggcactggagggttcggcttgcaataatagaatac
attcctttattggcaagtcagttgggtgttggattttttgatgacaaacttggtgcactc
tgcatgcagtggttaaaagataaggtttattctattcgtgatgctgctgctaataatgtg
aagcgactggcagaagaatttggaccagattgggcaatgcagcacatagttcctcaggtt
ttggacatgattaacaatcctcattatctgcatcggatgaccattctacattcaatttct
ttacttgcccctgttatgggctcagatattacttgttcaaaacttctaccagtggttatt
aatgcttcaaaagatagggtacccaacatcaagtttaacgtggccaaggtgctgcaatca
cttattccgattgttgatcaatccgtagtggagaagaaaatccgtccatgcttagttgaa
ttgagtgaggattctgatgtagatgtcaggttttttgccagccaagcactagaatcaagc
aatcaggtcatgatgtcttag
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