Gossypium hirsutum (upland cotton): 107908467
Help
Entry
107908467 CDS
T04793
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 2-like
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
107908467
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ghi01002
]
107908467
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107908467
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
107908467
Peptidases and inhibitors [BR:
ghi01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
107908467
Ubiquitin system [BR:
ghi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
107908467
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
UPF1_Zn_bind
CpXC
Motif
Other DBs
NCBI-GeneID:
107908467
NCBI-ProteinID:
XP_016691132
UniProt:
A0A1U8JLI3
LinkDB
All DBs
Position
D02:43633599..43640782
Genome browser
AA seq
1004 aa
AA seq
DB search
MGKRVKKNRRVPPKEKKVVAAQSPKAIPQEKTAGIDDVDDEVKAVKERKKCLHFDKGINI
DKLLTKLRSSDPIRCEDCREGRNDRRGGKGKSKHGKKKGSASVESKSESKAIWVCLECGH
YVCAGVGLPTASTSHAVRHLRQTRHHLVVQWDNPQLRWCFSCNIFIPVEKMEENSESKDV
LYEIVKLIKERSSESSTNDVEDVLSGSGSVICDIKSEGTISNFLDGKNGYVVRGLVNLGN
TCFFNSVMQNLLALNRLRDYFSNLDVSMGQLTISMKKLFAEIRPEMGLKNAINPKPFFAS
LCSKAPQFRGYQQHDSHELLRCLLDGLYTEELALKKHINASKSDAVTASQDLTFVDAVFG
GQISSTLCCEECGHSSTVYEPFLDLSLSVPTKKTPSKKAQPVFRAKKTKLPPKKVGRNRG
KVNKDVDQAPAKVVTAPVPNSESSGPGHIAVPQMEPKVASSGDSSRSHAAGPSTDESSSA
SRNLFDVVESQKEQVVESTVKENSAGTDDFAWLDYLTTENTLPENDTGADDFSWMDYLQQ
EIVADESDLISQNKNTSLQDSEEKELVPNEALAESCEVSVLKGETNKKTEDSSGNLQEEE
LPLLVQDSVVLLLPYKEDIPGTLSVRENEASSSNAGLGQEEVEFDGFGDMFNEPEIAEGP
IIGPSLANEVAETGFMAGSISDSDPDEVDDSNSPVSVESCLSHFIKPELLSDDNAWNCEN
CAKILRHQKLKAKKKQTKMGKDLLNGSETRSLDMEHQCPNGVRTISNGDISSSSDSSVFH
NKNQNGVKVENGQTSELDSVELEDASPLKSNSSVSSKCYAQEKCGGTRTIDSCNVENPSG
NETFRQSNSHMTENCQSGVIDDEELDSENLKVKRNATKRVLINKAPPVLTIHLKRFCQDA
RGRLSKLNGHVNFRETIDLRPYLDPRCEDADNCNYSLVGVVEHSGTMRGGHYIAYVRGGE
KRKGTTGIDHVGSQWYYVSDQHVRQASIEEVLRCEAYILFYEKV
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaagagttaaaaagaatcgtcgagtacctccgaaggagaaaaaggttgtggca
gctcaatctccaaaagctatacctcaggagaaaactgccggtattgatgatgttgacgat
gaagttaaagccgtaaaagagaggaaaaagtgcctgcattttgataaaggcatcaacata
gataaattgttgactaaacttaggtcatcagaccccataaggtgtgaagattgtagggaa
ggcagaaatgataggagaggaggtaagggaaagagtaaacatgggaagaagaagggaagt
gcttcggttgagtcgaaatctgaatcgaaagccatttgggtttgtttggagtgtggacat
tatgtatgcgctggagttggtttgccaacagcttctacctcacatgctgttcgacatctt
agacaaacccgtcaccacttggtggttcaatgggataatcctcaattgaggtggtgcttc
tcttgcaacatattcattccagttgagaaaatggaagagaacagtgaaagcaaagatgtt
ttatatgagattgtaaaattgattaaggaacgatcatctgaatcatccacaaatgatgtt
gaggatgttttgtcaggaagcggcagtgttatttgtgatatcaaatcagaaggaactata
tcgaattttttggatggaaaaaatggttatgtggttcgaggtttggttaatctcggtaat
acgtgcttctttaattcagtaatgcagaatcttctggctctgaataggctaagggactac
ttctcgaatctggatgtgtccatggggcagttaacaatttctatgaaaaagctttttgct
gaaataagacctgagatgggcttgaaaaatgctatcaatccaaagccattttttgcatcc
ctttgttctaaggctccccagtttagaggctatcagcaacacgacagtcatgaattgctt
cgctgcttacttgatgggctttatacagaggagttggctctaaaaaaacacattaatgct
tctaaaagtgatgcagttacggcaagtcaggatcttacttttgtggatgctgtatttggg
ggtcaaatttcgagtactctctgttgtgaggagtgtgggcactcgtcaacagtgtatgaa
ccatttctagatctctcactttcagtgccaactaagaaaaccccttctaaaaaggctcaa
ccagtctttcgagcaaagaaaacaaagctgccaccgaaaaaagttggcaggaatagagga
aaagttaacaaagatgtagatcaggcgccagctaaagttgttacggctcctgtacctaac
agtgaatcttcaggcccagggcatatagctgtgccccaaatggaacccaaggtggcatct
tctggtgattcttcacgctcacatgctgctggcccaagcaccgatgaaagcagttctgct
tcaaggaatctctttgatgttgtggagtctcagaaagaacaagttgtggagagtacagtg
aaggaaaattcagctgggacagatgattttgcttggttggattacctcacaacagagaat
acactcccagaaaatgatactggtgcagatgatttttcttggatggattacctgcaacag
gaaatagtagctgatgagagtgacttgatttctcaaaataagaatacttcccttcaagat
tccgaggaaaaggaactagttccaaatgaagctttagcagaaagttgtgaggtttccgta
ctcaagggggaaaccaataaaaaaacagaagattcttccgggaaccttcaagaagaggag
cttccattgctggttcaagattctgtggttcttttgcttccatataaagaagatattcca
ggtactttgagtgtgagagaaaatgaggcctcttcatcaaatgcgggtcttggacaagag
gaagtggagtttgatggctttggtgacatgtttaatgagcctgaaattgctgaagggccc
atcattggaccatctttggcaaatgaagttgctgaaactggttttatggctgggagtatt
agtgattctgatcctgatgaggttgatgacagtaattctccagtatccgtggaaagttgt
ttgtctcacttcataaagccggagcttctttcggatgataatgcttggaattgtgagaat
tgtgcgaaaattttgcgacatcagaagttgaaagcaaagaagaagcagactaaaatggga
aaggatttactcaatggaagtgagacccgaagtttagatatggaacaccaatgccctaat
ggagttagaaccattagtaatggcgatatcagtagttccagtgatagctcagtttttcat
aacaagaatcaaaatggtgtaaaagttgaaaatggtcaaacaagcgagctagattctgtt
gaattagaagatgcaagtccgttgaaatcaaattcttcagtttcctctaaatgttatgct
caagaaaaatgtgggggtacccgaactattgattcttgcaatgttgaaaatcctagtggt
aatgagacatttcgtcagagtaattcacatatgactgaaaactgtcaatcaggcgtaatt
gatgatgaagagttagactccgaaaatttgaaggttaagagaaatgctacaaagagggtc
ctcataaacaaggcaccgcctgttctgactattcatttgaagaggttttgtcaagatgct
cgtggtcgcttgagtaaattgaatggtcatgtcaatttcagagagacaattgatcttaga
ccatatctggatcccaggtgtgaagatgcagataattgcaattacagtctggtgggggtt
gtggagcattcgggaacaatgagaggtggtcactacattgcatatgtgagaggaggtgag
aaaaggaaagggacaaccggtatcgaccatgttggatctcaatggtattatgtgagtgat
caacatgttcgccaagcatcaatcgaagaagttcttcgctgcgaggcatacattttattc
tatgaaaaagtttga
DBGET
integrated database retrieval system
