Gossypium hirsutum (upland cotton): 107912244
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Entry
107912244 CDS
T04793
Name
(RefSeq) ABC transporter B family member 21-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
107912244
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ghi02000
]
107912244
04147 Exosome [BR:
ghi04147
]
107912244
04090 CD molecules [BR:
ghi04090
]
107912244
Enzymes [BR:
ghi01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
107912244
Transporters [BR:
ghi02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
107912244
Exosome [BR:
ghi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
107912244
CD molecules [BR:
ghi04090
]
Proteins
107912244
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_22
ABC_ATPase
AAA_16
RsgA_GTPase
Zeta_toxin
AAA_21
AAA_15
DUF87
AAA_24
AAA_30
AAA_7
APS_kinase
DUF815
DLIC
SbcC_Walker_B
Motif
Other DBs
NCBI-GeneID:
107912244
NCBI-ProteinID:
XP_016695815
UniProt:
A0A1U8JZV4
LinkDB
All DBs
Position
D11:10063552..10069768
Genome browser
AA seq
1295 aa
AA seq
DB search
MASENGFNGEKDTDLHEAGTSKSQEESQKVPGDNGENQDPASSKGDEKTNTVPFYKLFAF
ADSTDILLMIVGTTAATGNGLSMPLMTILFGNLIDSFGTNKSNGNVVEAVSKVSVRFVYL
AMGAAAAAFLQVSCWMITGERQAARIRGLYLKTILRQDVAFFDVETNTGEVIGRMSGDTV
LIQDAMGEKVGKFSQLISTFIGGFVIAFVKGWLLTLVMLSAIPLLIISGGTIAVIVSKMA
SRGQNAYAKAATVVEQTIGSIRTVASFTGEKQAINNYNKSLVTAYRSGVHEGTAAGVGVG
LVMLVIFCSYALAVWFGGKMILEKGYTGGQVLNVIMAVLTGSMSLGQASPCMTAFAAGQA
AAFKMFETIKRKPEIDSYDTSGKVLEDIRGDVELRDVYFSYPARPEEQVFSGFSLSIPSS
TTVALVGQSGSGKSTAISLIERFYDPQAGEVLIDGINLKEFQLRWIRGKIGLVSQEPVLF
TSSIRDNIAYGKEDATTEEIRAAAELANAANFIDKLPQGLDTMVGEHGTQLSGGQKQRVA
IARAILKDPRILLLDEATSALDAESERVVQEALDRIMGNRTTVIVAHRLSTVRNADSIAV
IHKGKMVEKGSHSELLKDPEGAYSQLIRLQEVNKGLEQLADVSDVNPELFRQSSLRRSFK
RSISRGSSRTSSRNSSFSQPFGLPTEMNVTDPAMLDTEDPAEPPLKQAKEVSILRLAYLN
KPEIPVILIGTLFAAANGVILPLFGILISNMIKTFYQPPDELKKDSRFWALIFLSLGLAS
FLINPARTYFFSIAGCKLIQRIRSTCFEKVVRMEVAWFDEPDNSSGSIGARLSADAASIR
ALVGDALAQLVSSFASASAGLVIAFAASWKMAFIILVLIPLIGVNGYIQAKFMKGFSADA
KMMYEEASQVASDAVGSIRTVASFCAEEKVMQLYKKKCEGPMKTGIRQGLISGSGFGLAF
FFLFSVYATSFYAGAQLVEHGQATFTDVFQVFLALTMAAVGISQSSSFAPDSNKAKIAAA
SIFAIIDRQSKIDPSDESGMTLENVKGNMELRDVSFKYPSRPDIQIFQALSLSIHAGKTV
ALVGESGSGKSTVISLLQRFYDPDSGTITLDGVKIQTLQLKWLRQQMGLVSQEPVLFNDT
ICANIAYGKGGNATEAEIIAASELANAHKFISALQQGYDTVVGERGLQLSGGQKQRVAIA
RAIVKSPKILLLDEATSALDAESERVVQDALDKVMVNRTTVVVAHRLSTIKNADVIAVVK
NGVIVEKGKHDTLINIKDGFYASLVALHMTASTSQ
NT seq
3888 nt
NT seq
+upstream
nt +downstream
nt
atggcctctgagaatggttttaatggtgagaaagataccgacttgcatgaagccggcaca
tcgaaaagccaggaagagtcacagaaagtccctggcgataatggagaaaatcaagatcct
gcaagcagcaaaggagatgagaaaactaacacggttccattttacaagctgtttgcattt
gctgattctacggatatcttattaatgatcgtcggcacaaccgctgcaactgggaatggt
ctatctatgccccttatgacaatcctgtttgggaatctcattgattcttttggaacaaac
aagagtaatggcaacgtggttgaagcagtctccaaggtttctgtgagatttgtctacctg
gcgatgggggctgcggcggctgcgtttctccaggtgagttgctggatgatcacaggtgag
agacaagctgcacgaatacggggcctgtacttgaaaaccatattgaggcaagacgttgcc
ttctttgatgtggaaacaaacacaggggaagttattggaagaatgtctggggacacagtt
ctcatacaggacgccatgggcgaaaaggtagggaagttttcacaattgatatccacgttc
attggaggctttgttatagcatttgtcaaaggatggcttcttactctcgtaatgttatct
gctatccctctacttataatatctggtggaaccatagccgttatagtatccaagatggca
tcccggggacaaaatgcttatgctaaagctgccactgtagttgaacagacaattggttcg
atccgaactgttgcgtcgtttactggtgagaagcaagcaataaacaattacaataagtca
cttgttactgcttatagatcaggcgttcatgaaggcactgctgctggagtaggtgttggc
ttagttatgctagttatattctgcagttatgctttggctgtctggtttggtgggaagatg
attttggagaaagggtacactggtggtcaagtacttaatgtgatcatggctgtattgaca
ggttccatgtctctggggcaagcatctccatgcatgactgcgtttgcggctggtcaagct
gcagcatttaagatgtttgagaccatcaaaaggaagccagagattgattcctatgacacg
agtggaaaagtgttggaggatattcgtggggatgtagaactgagggatgtttatttcagt
taccctgccagaccagaggagcaagttttcagtggattctctctttctattccaagtagc
acaacagtagctttggttggacaaagtggaagtgggaaatcaactgcaatcagtctgatc
gagagattttatgatccacaagccggtgaggttcttatcgatggcattaatctcaaggag
ttccagcttagatggataaggggaaagattggtcttgttagccaggaaccagtgttgttt
acgtcaagcataagggataatatcgcatatggtaaagaagatgcaaccacagaagagata
agagcagcagctgagcttgcaaatgctgctaacttcattgataaactacctcagggacta
gataccatggttggagagcatggaactcagctttctggtggacaaaagcagagagtggca
attgcaagagcaatcttgaaagacccacggattttgcttttagacgaagccacaagtgca
ctcgacgcagaatctgaaagagttgttcaagaggcattggacaggataatgggcaatagg
actactgtcattgttgctcatcgtttaagtactgtgagaaatgcagattcgattgctgta
attcataaaggaaagatggttgaaaaagggtcgcattcagaactgctcaaggatcctgag
ggagcttactctcagctcattcgtttacaagaagtaaataaagggttggaacagcttgca
gatgtatcagatgttaatccggaattgtttagacaatcgagcctaagaaggtcattcaag
cgatcaatcagcaggggatcatctagaactagcagccgcaattcttctttctctcaacct
tttggtttacctactgaaatgaatgtcactgatcctgcaatgttagatacagaagaccct
gctgaaccaccattgaaacaggctaaggaggtttctatcctccggcttgcttacctcaac
aagccagagattcctgtgatcttaattggaactctttttgcagctgccaatggtgtgata
cttccacttttcggtatcctgatttccaatatgatcaaaacattttatcaacctcctgat
gaattgaaaaaggattcaagattctgggcactgatatttttgtcccttggcctggcatca
tttctgataaatccagctcgaacatacttcttttctatcgccggatgtaaattaatccaa
cgaatcagatcaacatgtttcgagaaagtggtccgcatggaagttgcttggttcgatgaa
cctgataattcaagtgggtcaataggtgcaaggctctcggcagacgcagcctcaatacgt
gccctggttggagatgcactagctcagttggtctcaagctttgcatcagcatcggctggt
ttggttattgcttttgctgcaagttggaagatggcatttattatcctagtactaatccct
ctcataggggtcaatggatacattcaagcaaaattcatgaagggattcagtgcagatgca
aagatgatgtatgaggaggccagccaagttgccagtgatgcagttgggagtataagaaca
gttgcttccttttgtgcagaggaaaaggtaatgcaactctacaaaaagaaatgtgagggt
ccaatgaaaaccgggataaggcagggtttgattagcggatcaggattcggacttgcattc
ttctttctgttttctgtttatgcaacaagtttctatgcaggagctcaacttgttgagcac
ggccaggctacattcacagatgtttttcaagttttcttagctttaaccatggcagctgtt
ggaatttctcaatcaagttcctttgctcctgattccaacaaagccaagatcgcggctgct
tccatatttgcaattattgatcgccagtctaaaatagacccaagtgatgagtctgggatg
acactagaaaatgtgaagggaaatatggagcttcgtgatgttagttttaagtatccatca
aggccagatattcaaatcttccaagccttaagcttgtctattcatgccggaaagacagtt
gccctggttggagaaagtgggagtgggaaatctactgtaatctcattattgcagaggttt
tatgatcctgattcaggaactatcactcttgatggagtcaaaatccaaacgctccaattg
aaatggctgaggcaacaaatggggcttgtcagccaagaacctgttttgttcaatgataca
atctgtgccaacattgcatatggaaagggaggaaatgcaactgaagcagaaattatagca
gcatcagagttggccaatgctcataagttcatcagtgcattacaacagggttacgatacc
gtggtgggagagcgaggacttcaattgtcaggtggacaaaagcaacgcgtagccatagca
cgagccatcgttaaaagtccaaagatactgctattagatgaggctacaagtgcactggat
gcagaatcagagagagtggttcaggatgcactagataaagtgatggtgaaccgcacgacg
gttgtagttgctcataggctatccacaatcaagaatgcagatgttatagctgtggttaaa
aatggggttattgtagagaaaggaaagcatgacactttgataaatatcaaagatggtttc
tatgcttccttagttgcacttcacatgactgcttccacttcgcagtag
DBGET
integrated database retrieval system
