Gossypium hirsutum (upland cotton): 107913786
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Entry
107913786 CDS
T04793
Name
(RefSeq) cullin-4-like isoform X1
KO
K10609
cullin 4
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03420
Nucleotide excision repair
ghi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107913786
09124 Replication and repair
03420 Nucleotide excision repair
107913786
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107913786
03400 DNA repair and recombination proteins [BR:
ghi03400
]
107913786
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ghi04147
]
107913786
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Cullin
107913786
DNA repair and recombination proteins [BR:
ghi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
107913786
TCR (transcription coupled repair) factors
Cul4-CSA complex
107913786
Exosome [BR:
ghi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
107913786
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Motif
Other DBs
NCBI-GeneID:
107913786
NCBI-ProteinID:
XP_016697906
UniProt:
A0A1U8K5W7
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Position
D10:3768247..3774709
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AA seq
824 aa
AA seq
DB search
MSLPPTKRSLSSNAAVASSSSSSSSSSSSSHFQPSMKKAKSQAVACPLDPNKNGLHNHHN
NQGDNDVVFDPSSPMSLDDDSKSDDARAPAAANLSRKKATPPQPAKKLVIKFVKAKPTVP
TNFEEETWAKLKSAINAIFLKQPDSCDLEKLYQAVNDLCLHRMGGSLYQRIEKECEARIS
AALRSLVGQSPDLVVFLSLVEKCWQDLCDQMLMIRGIALYLDRTYVKQTPNVRSLWDMGL
QLFCKLLSLAPEVEHKTVTGLLRMIESERLGEAVDRTLLNHLLKMFTALGIYSESFEKPF
LERTSEFYAAEGMKYMQQSDVPDYLKHVEMRLNEENERCLLYLDALTRKPLIATAERQLL
ERHIPAILDKGFMMLMDGHRIEDLQRMYSLFSRVNALESLRQALSSYIRRTGQSIVMDEE
KDKDMVSSLLEFKASLDSILEESFSKNEAFCNTIKDSFEHLINLRQNRPAELIAKFLDEK
LRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMI
SKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQARTKLRSGIEMSVHVLTTGYWPT
YPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKADFSKGKKELAVSLFQ
TVVLMLFNDAQKLSFQDIKDSTGIEDKELRRTLQSLACGKVRVLHKLPKGRDVEDDDSFI
FNEGFTAPLYRIKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKVLSHTLL
ITELFEQLKFPIKPADLKKRIESLIDREYLERDKNNPQIYNYLA
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgtctctccccccaaccaaacgctctcttagctccaacgccgctgttgcttcttcttct
tcttcttcttcttcctcttcctcttcttctcactttcaaccgtcaatgaagaaagccaag
tcccaagccgtggcttgtcctcttgaccccaataagaacggccttcacaaccaccacaac
aaccaaggcgataacgacgtcgtcttcgacccttcttcacctatgtccctcgacgacgat
tccaagtccgacgatgctcgcgctcccgccgccgccaatttgtctcgcaaaaaggctacc
ccacctcaacccgccaagaagctcgtcatcaaattcgttaaagcaaaaccgacagtgcct
acgaattttgaggaggaaacgtgggcaaagctgaagtcagccattaatgctatttttctg
aagcaaccagattcatgtgacttggagaagctttatcaggctgtcaatgatctttgcctg
cataggatgggaggaagtctttatcaacgaattgaaaaagagtgtgaagcacgtatatcg
gcagcattaagatctttggttgggcaaagtccggacctcgtggttttcttatcgcttgtt
gagaaatgttggcaagatctttgtgatcaaatgttgatgattcgtggtatagccttgtac
ctggacagaacatatgttaaacaaaccccaaatgtacgttcattgtgggacatgggcttg
caacttttctgtaaacttctttctctggctccagaagttgagcacaaaactgtcaccggt
cttttaagaatgattgagagtgagaggttaggtgaagcagttgacagaacactacttaac
catcttttgaagatgtttactgctttaggtatttactcagaaagctttgagaagccattc
ctggagcgtacatccgagttttatgcagctgaaggaatgaaatacatgcagcaatctgat
gttccagattacttgaagcatgtagagatgaggttaaatgaagaaaatgaaagatgctta
ctctacctggatgctcttacgagaaagccgcttatagcaacagcagaaaggcaactgctg
gaacgtcatatacctgccattcttgataagggatttatgatgctgatggatggacaccgt
attgaggaccttcagaggatgtactcactgttttcaagggtcaatgctcttgaatcactc
aggcaggccctaagctcatatattcggagaactgggcagagcattgtcatggatgaagag
aaagacaaggacatggtgtcttccttgttagaattcaaggcttcacttgactccatattg
gaagaaagcttttccaagaatgaggcattttgcaacaccattaaggattcttttgagcat
ctaattaatcttcgtcagaatcgacctgctgagcttattgctaagtttctggatgaaaag
cttcgtgctggtaataagggtacttctgaagaggaattagagggtacacttgataaagtt
ttggttttattcaggttcatccagggcaaggatgtttttgaagcattctataagaaagat
cttgctaaaaggctgcttttagggaagagtgcttctattgatgcagagaaatccatgatt
tctaagctgaagacagagtgtggcagccagtttacaaacaaacttgaaggaatgttcaag
gatattgaactgtcaaaggagataaatgaatcattcaagcagtcatcccaagccaggaca
aaacttcgatcaggaattgagatgagtgtccatgtcttaacaactgggtactggccaaca
tatccacctatggatgttaggcttccacatgaattgaatgtctatcaggacatcttcaag
gagttctacttgagtaagtacagtgggagacgcctaatgtggcaaaattcattgggtcat
tgtgtgttgaaagcagatttttccaaaggtaaaaaggagctggcagtttccctgttccag
actgtagttctgatgttgttcaacgatgcccaaaagcttagctttcaagacattaaagac
tccactggcatagaggacaaggaattgagaaggaccctgcagtcccttgcatgtgggaaa
gtgagagtcctgcataagttgccaaaagggagagatgtcgaagatgatgattctttcatt
ttcaacgaaggatttactgctcctctctatcgtataaaggtaaatgcaatccagatgaaa
gagacagtggaggagaacacaagcaccactgaaagagtatttcaagaccgtcaatatcag
gttgatgctgctattgttcggataatgaagacgaggaaagtgttgagtcacactcttttg
ataactgaactcttcgaacagctaaagtttcccataaaaccggctgatttgaagaaaaga
atcgagtctctcattgacagggagtacctggagcgggacaagaacaacccacaaatatac
aattatttggcataa
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