Gossypium hirsutum (upland cotton): 107917882
Help
Entry
107917882 CDS
T04793
Name
(RefSeq) probable GMP synthase [glutamine-hydrolyzing]
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
107917882
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ghi03400
]
107917882
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
107917882
DNA repair and recombination proteins [BR:
ghi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
107917882
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
Motif
Other DBs
NCBI-GeneID:
107917882
NCBI-ProteinID:
XP_016702755
UniProt:
A0A1U8KJX2
LinkDB
All DBs
Position
A01:18614254..18617272
Genome browser
AA seq
407 aa
AA seq
DB search
MCTSKAKVTTGTTHVEITPPAVARINGRPVLQPTCNRVPSLDRRNSLKKIPPISPPPPAS
LPFTPSATSTTTVANGSRAKASLTPPLSPSSKFTTTKRWSDPNALNSSSEKVAIPRNTTK
TLDRKKSKSFKEGMGNNGLSSYIEPSLSYSSSLLVEAPGSIAAVRREQVALQQAQRKMKI
AHYGRSKSAKFESKVVPLDNTKPAEEKKRCSFITPNSDPIYVAYHDEEWGVPIHDDSMLF
ELLVLSGAQVGSDWTSILKKRQDFRDAFSGFDAETVANFTEKQMTTISSEYGIDISRVRG
VVDNANRILEVKREFGSFDKYIWGFVNHKPMSTQYKFDHKIPVKTSKSESISKDMVRRGF
RFVGPTVVHSFMQAAGLTNDHLITCHRHLPCALLAIQRPPVHSLPDL
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgtgtacctctaaggctaaggtgaccacaggcaccactcatgttgaaataacaccacct
gctgtcgcccggatcaatgggcgtcctgtccttcagcctacttgtaatcgtgttcctagc
cttgatcgtcgtaattccttgaaaaaaataccacccatctctcctccaccacctgcatca
ctaccatttacgccatcagccaccagtactacaactgttgccaatggtagcagggctaag
gcctcactcacaccgcctttatccccaagctcaaagttcaccaccaccaagcgatggagt
gatcccaatgcgttgaactcaagttctgaaaaggttgccattcccagaaacaccacaaaa
accttggataggaagaaatccaaaagtttcaaagagggtatggggaataatggattatct
tcttatattgagccatcattgagttattcttcttctctgctggttgaggctccaggaagt
attgctgcagtcaggagggaacaggtagctcttcaacaagcacaaagaaagatgaaaatt
gcacactatggaagatcaaaatcggccaaatttgaatctaaggttgttcctctcgacaat
accaagcctgccgaggaaaagaagaggtgcagtttcattacgcccaactcagatcctatc
tatgtggcttaccatgacgaagaatggggagttccaatccatgacgatagcatgctcttc
gagttgttggttctaagtggtgctcaagtaggctcggattggacttcaatcttgaagaaa
cgtcaagatttcagggatgcattttcagggtttgatgcagaaactgtagccaacttcact
gaaaaacagatgaccacaattagctctgaatatgggattgacataagcagagttcgaggt
gttgtggacaacgccaaccgtattctcgaggttaagagggagtttggatcatttgacaaa
tatatatggggatttgtgaatcacaagccgatgtcgacgcaatacaaattcgatcacaag
atcccagttaagacatcaaagtctgagagcataagcaaggacatggtgagaagggggttt
aggtttgttggaccaacggtggtccattccttcatgcaagccgccggtctaaccaacgac
cacctcatcacatgccacaggcacctcccttgcgccttgttagccatccaaaggccaccg
gtccactcactccctgatttgtag
DBGET
integrated database retrieval system
