Gossypium hirsutum (upland cotton): 107919884
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Entry
107919884 CDS
T04793
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 10
KO
K14777
ATP-dependent RNA helicase DDX47/RRP3 [EC:
5.6.2.7
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ghi03009
]
107919884
Enzymes [BR:
ghi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107919884
Ribosome biogenesis [BR:
ghi03009
]
Eukaryotic type
90S particles
Helicases
107919884
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
107919884
NCBI-ProteinID:
XP_016704789
UniProt:
A0A1U8KVL5
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Position
A13:complement(89099161..89104630)
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AA seq
444 aa
AA seq
DB search
MAEEEKEEMKSFKDLGLCEELVEACDSLGWKYPTKIQVEAIPHALEGKDLIGLAQTGSGK
TGAFALPILHALLESHSKQGYKSAPVFFALVLSPTRELAIQIAEQFEALGSGISLKCAVL
VGGVDIMQQQIALGKRPHIIVGTPGRLVDHLTNTKGFSLRMLKFLVLDEADRLLNEDFEK
ALDDILNVIPRDRHTYLFSATMTKKVKKLQRACLRNPVKIEAASKYSTVDTLKQQYRFIP
AKYKDCYLVYILTEMSGCTSMVFTRTCDATRLLAFILRNLNIRAIPISGQMTQAKRLGAL
NKFKSGECNVLVCTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISL
VNQYELEWYLQIEKLIGKKLSEYPAQEEEVLQYLESVTEAKRLSQMKLKEIGGTKKRRGG
DDDDEDIERYLGVKGKSSKKVKRK
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggaagagaaggaagagatgaaatcgttcaaagatttaggtttatgcgaggaa
ttagttgaagcctgcgacagtttaggttggaaatatcctaccaaaatccaagtagaagcc
attccacatgctctcgaagggaaggatttgattgggcttgcccaaacgggttccggtaaa
acgggggcgtttgctcttcccatacttcatgcgcttttggaaagccattcgaaacaagga
tataaatccgcgcctgtgttttttgctttggtgctttccccaacacgggagcttgcaatc
caaattgctgaacagtttgaagctttaggatctgggattagtttaaaatgtgctgtgctt
gttggaggggtggacataatgcaacaacaaattgcccttgggaagcggccacacattatt
gttggaactcctggacgccttgtggatcacctaaccaatactaaaggtttttctcttcgt
atgctaaaatttttggtcctagacgaggcagataggttgctgaatgaggattttgagaaa
gcacttgacgatattttgaatgttattcctcgggataggcacacgtatttgttttcagca
accatgaccaaaaaggtgaagaagctgcaaagggcatgtctgagaaatcctgtgaagatt
gaagctgcctcaaaatattctactgttgacacattgaagcagcaataccggtttatacct
gcgaagtacaaggattgctatcttgtttatattttgactgagatgtctggatgtacatct
atggttttcactcgaacttgtgatgcaactcgccttttggcttttattcttcggaatctt
aatataagggccattcctattagcggtcaaatgactcaggcaaagaggctaggagccttg
aataagttcaagtctggggagtgtaatgttcttgtctgcactgacgttgctagtagagga
ctggacatcccatctgttgatatggttattaattatgatatccctacaaactctaaggat
tacatccatcgtgtgggtagaacagctcgtgctggaagatctggtgttgctatttcacta
gtcaatcagtatgagctggagtggtatcttcagatagaaaagcttattggcaaaaagtta
tccgagtatcctgctcaagaagaggaagtcttgcagtacttagaaagtgtcacagaagcc
aagagactatcacagatgaaacttaaagaaattggaggcacaaaaaagaggaggggcgga
gatgatgatgatgaggatatagagagatatctaggcgtcaaaggcaagtcctccaagaaa
gttaagagaaaatga
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