Gossypium hirsutum (upland cotton): 107920334
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Entry
107920334 CDS
T04793
Name
(RefSeq) vacuolar protein sorting-associated protein 53 A
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107920334
Membrane trafficking [BR:
ghi04131
]
Protein recycling
Others
EARP complex
107920334
Endosome - Golgi transport
Tethering complex
GARP complex
107920334
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
COG4_N
MUN
RINT1_TIP1
Vps54_N
COG7
DUF401
Motif
Other DBs
NCBI-GeneID:
107920334
NCBI-ProteinID:
XP_016705483
UniProt:
A0A1U8KWN0
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Position
A08:complement(112957402..112967557)
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AA seq
824 aa
AA seq
DB search
MDKMSTLEYINQMFPTEASLSGVEPLMQKIQSEIRRVDAGILAAVRQQSNSGTKAKEDLA
AATHAVEELTYKIREIKTKAEQSEMMVQEICRDIKKLDFAKKHITSTITALHRLTMLVSA
VEQLQFMASKRQYKEAAAQLEAVNQLCSHFEAYRDIPKITELREKFKSIKQILKSHVFSD
FSSLGTGKESEETNLLQHLSDACLVVDALEPSVREELVNNFCSRELTSYEQIFEGAELAK
LDKTERRYAWIKRRMRTNEEIWKIFPTSWLVPYRLCIQFCKKTRKQLEGILDNMKEKPDV
ATLLMALQRTLEFEDELAEKFGGGTQSREIGNEIEEIGRQNNSQSASDIRKKYEKKLAAH
QGSENEEKDGNKDLSAPGAGFNFHGIISSCFEPHLIVYIELEEKTLMENLEKLVQEETWD
VEEGSQNNVLSSSMQLFLIIKRSLKRCSALTKSQTLYNLFKVFQRVLKAYATKLFGRLPK
GGTGIVAAATGMDGQIKTSDRDERVICYIVNSSEYCHKTSGELAESVSKIIDSQFADRVD
MSEVQDEFSAVITKSLVTLVHGLETKFDAEMAAMTRVPWGTLESVGDQSGYVNGINMILS
SSIPVLGSLLSPIYFQFFLDKLASSAGPRFYMNIFKCKQISETGAQQMLLDTQAVKTILL
EIPSLGRQTSGAAGYSKFVSREMSKAEALLKVILSPVDSVADTYRALLPEGTPMEFQRIL
ELKGLKKSDQQSILDDFNKGSPAISRPSSAAPVGQSMAPAPPASTVPAISNPASAGFIAS
REDVLTRAAALGRGAATTGFKRFLALTEAAKDRKDGPFRKLFNA
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atggacaaaatgagtactctagagtacatcaaccagatgtttcccacagaggcttcttta
tctggcgttgagccactaatgcaaaagatacaaagtgagatccgtagagttgatgctgga
atactggctgctgttcgccaacagagtaattcaggaaccaaagctaaggaagatcttgct
gctgctacacatgctgtggaggaactaacatataaaatccgtgaaataaaaacaaaagct
gagcaaagtgagatgatggttcaagaaatatgccgcgatatcaagaagctggactttgct
aagaagcatataacctctacaattacagctcttcatcgtctaaccatgctagtctccgct
gtagaacaacttcaatttatggcgtcaaaacgacaatataaggaggcagctgcccagtta
gaggctgtaaaccagctttgtagccattttgaagcctacagggatatcccaaaaatcact
gagctaagggagaagtttaagagtattaaacaaatactgaaatctcatgtcttctctgat
ttctcaagcttaggaaccggcaaagagtccgaagagacaaatttgctgcagcacttgtct
gatgcttgtttagttgtcgatgccttggagccatctgtgagagaggagttagtaaataac
ttttgcagcagagagcttacttcatatgaacagatctttgaaggagctgaactagctaaa
ctggataaaacggaacgaagatatgcatggatcaagcgtagaatgagaacaaatgaggaa
atatggaaaatctttcctacctcttggcttgttccttaccgtctctgtatccagttctgt
aagaagacaaggaaacaattggaggggatccttgacaacatgaaagagaagcctgatgtt
gcaacgttgctgatggcattgcaaagaactttagaatttgaggatgagttggcagagaaa
tttggtggtggtactcagagtagagagattggaaatgaaattgaagaaattggtaggcag
aataatagtcaaagtgcatcagatattcgaaagaagtatgagaaaaagcttgctgcacat
caaggaagtgaaaatgaggaaaaggatggaaacaaagatttgtctgcacctggagctggg
ttcaacttccatgggattatttcatcttgctttgagcctcacttaattgtatatatagaa
ttagaagaaaagacgctgatggagaatctcgagaaacttgttcaggaggaaacatgggat
gttgaggaaggaagtcagaataatgttctttccagtagtatgcagttgtttctcataatc
aagagaagcttaaagcgatgcagtgctctgacaaagagccaaactttatataatttgttc
aaggtgtttcaaagagtcctcaaagcctatgctacaaagctttttgggagactgccgaag
ggtggtacagggattgttgctgcagccactggtatggatgggcagataaagacatctgac
agggacgaaagagtgatctgctatatcgtaaattcatctgaatattgccataaaacgtct
ggtgaactggctgaaagtgtatccaaaatcatcgattctcaattcgcagaccgggtggat
atgtctgaagtgcaggatgaattttcagcggttataaccaaatctttagtaaccttggtg
catggcctggaaactaaatttgatgctgaaatggctgcaatgacccgtgttccatggggt
acccttgaaagcgttggggaccaatcaggatatgtcaatggcataaatatgatccttagc
agtagcattcctgtacttgggagccttctttcacctatttacttccagttcttcttggac
aagcttgcatcatcggctggcccccggttctacatgaatattttcaaatgcaagcagata
tcagaaactggagcccagcaaatgctgttggatactcaagctgtaaagacaattcttttg
gaaattccttcacttggtcgacagacatctggtgctgctggctattcaaaatttgtaagt
agagagatgagcaaagctgaagcacttttgaaggttatactatctcctgttgattcggtt
gcggatacatatcgggcattgctaccagagggaacaccaatggagtttcagcgaattcta
gagcttaagggcctcaagaaatcggaccaacaaagtatcttagatgacttcaacaaaggt
tcgccagcaatctcacgaccttctagtgcagcaccagttgggcaatcgatggcaccagcc
ccacctgccagtacagttccagccatttcaaatcccgcttcagctggatttattgcttct
cgggaagatgtgctaacaagagcggctgctcttggacgtggtgctgcgacaacagggttc
aagaggttccttgctttaaccgaagctgccaaggaccgtaaagatggacctttcagaaag
ctcttcaatgcatga
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