KEGG   Gossypium hirsutum (upland cotton): 107920717
Entry
107920717         CDS       T04793                                 
Name
(RefSeq) DNA repair protein REV1
  KO
K03515  DNA repair protein REV1 [EC:2.7.7.-]
Organism
ghi  Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ghi03400]
    107920717
DNA repair and recombination proteins [BR:ghi03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Y-family DNA polymerases
    107920717
SSDB
Motif
Pfam: IMS IMS_C BRCT BRCT_2 POLH-Rev1_HhH LIG3_BRCT IMS_HHH PTCB-BRCT DUF1805 UBM
Other DBs
NCBI-GeneID: 107920717
NCBI-ProteinID: XP_040966010
LinkDB
Position
D13:complement(5004613..5015348)
AA seq 1134 aa
MSADSSNSKRSFNSHSSKNQSNSSKKRTSNQKTLGMAWGSNSLSSSRSSFRSSPFSDFGS
YMVVKNRKLQNQFDAEASNSTRSDSSAKPIFHGVSIFVDGFTVPSSQELRQYMLNHGGRF
ENYFSRHRVTHIICSNLPDSKIKNLRSFSSGLPVVKPMWILDSVAANKLLSWVPYQLDQL
ANNQPTLSAFFTTKCNPADEGAFTNAICEVKHENEVLCLKDASKDASFSEAGNSFERRKQ
ATEENDELKYENTDKTVIDGPSNSYSEEPEEVKVVEQSNLQEEDESMANDRLQACPEQSS
SSVSSRCFDNHGIRGSPTSTVIGPSKHRHSTLGDPNFVENYFKNSRLHFIGTWRNRYRSR
FPSLSNGFTKSHSNVSAGTQKTPIIHIDMDCFFVSVVIRSHPELNDKPVAVCHSDNPKGT
AEISSANYPARDYGIKAGMFVRDAKSLCPQLVILPYNFESYEEVADQFYNILHKHCNRVQ
AVSCDEAFLDVTDLEGKDPQLLASAVRKEISEATGCTASAGIAENMLMARLATRTAKPNG
QCYIHPERVDEYLDQLPIKVLPGIGHVLAEKLKNKNVRTCGELRLISKDSLQKYFGIKTG
EMLWNYSRGMDNRLVGMIQESKSVGAEVNWGVRFRDLQHAQHFLLDLCKEVSLRLQGCGV
QGRTFTLKIKKRRKDAGEPAKFMGCGDCENLSHSTTVPLATDDIEVLQRISKQLFGSFHI
DVKDIRGVGLQVSRLESADTSRQAPERNSLKSWLMSASASSKQQFDINRIAKECVDSEGK
SVGGNSGVLRIASVENSVHETNNAPNGEGGSNQSSSVPPLCHLDMGVVENLPSELLSELN
EIYDGKLVELITKRKVQGDKSTGSACFFPPEPAQVAVEEAERSRNSASVSLRRTALEMKG
TQHILEELRMVPDSEARPDSVAISTAGLENNDLVPSSLSQVDTSVLQQLPEELRADIFEA
LPAHRMPEGTALGPRTDNMHPPLGIKTATDNQPGSTDSGLSNNLWIGDPPLWVDKFKVSK
LSTLNFFVDMYYKANSAESLSSILQCIIAESLHPLNARCDAWNEAIHSFSELLMNYIKLK
IVVDIEEIYVCFRLLRRLSTKSQFFLEVYNLVFPHLQASVDENYSGTLHIPPIK
NT seq 3405 nt   +upstreamnt  +downstreamnt
atgagtgcggattcctctaattcgaaacgaagcttcaattcacattcttcgaaaaatcaa
agtaatagcagcaagaagaggacaagtaaccagaaaaccctaggcatggcttggggcagc
aattctctatcttcctctcgctcctcttttcgctcttctcctttctctgattttggaagt
tatatggtagtgaagaatagaaagcttcaaaatcagtttgatgcagaggcttcgaattct
actcgtagcgattcttctgcgaaacctatttttcacggggtttctatatttgttgatggt
ttcacggttccatctagccaggagctgcgacaatatatgttaaaccacggtggtcgattt
gagaattatttttcaaggcatagagtcactcatatcatctgcagcaatcttcctgacagt
aaaatcaagaatctcaggtcatttagcagtggacttcctgtagtgaaacctatgtggatt
ctagattctgttgctgccaacaaacttttgagttgggttccttaccagcttgaccagctt
gctaacaatcaacctacattgtcagccttcttcactacaaaatgtaatcctgcggatgag
ggtgcttttacaaatgcaatttgtgaagtaaaacatgaaaatgaggttttatgtttgaag
gatgcatcaaaggatgcaagtttttctgaagcaggtaattcttttgaacggaggaagcaa
gctactgaagaaaatgatgagcttaagtatgaaaatactgataaaacagtaattgatggg
ccaagtaacagctatagtgaagaacctgaggaagtaaaggtggtagaacagagtaatctg
caggaggaggatgaaagcatggcaaatgacagacttcaggcctgtcctgaacagtcctct
tcatctgttagtagccgttgttttgacaatcatggtataagaggatcacccacatcaaca
gtcattggaccttccaagcatcggcattcaactcttggagatcccaattttgtggagaat
tacttcaagaattcaaggctgcatttcattggaacctggagaaatagatatcgtagccgt
tttcctagtttgtcaaatggatttacaaagtctcattcgaatgtctctgctggtactcaa
aagactcccattatccatattgacatggactgtttttttgtctcggtggttatcaggagc
catcctgaattaaatgacaagcctgtagctgtatgccattcagacaatccaaaaggaact
gctgaaatctcttctgcaaattatcctgctcgagattatggaattaaggcaggaatgttt
gttagagatgccaagagtctatgcccccaacttgttattctcccgtacaactttgaatca
tatgaggaggttgccgatcaattctataacatcttgcataaacactgcaacagagttcag
gctgtcagctgcgatgaagcatttttagatgtcacagacttagaaggtaaagatcctcag
cttttagcttcagcagtacgaaaggaaatatctgaagctacaggatgcactgcaagtgct
gggattgcagagaacatgcttatggcccgtctagccactagaactgctaaaccaaatggt
caatgttatatccatcctgagagggttgatgagtacttggatcaacttccaataaaagta
ctccctggaataggtcatgtactggctgaaaaattgaaaaataaaaatgttcgaacttgt
ggggagttgcgtttgatttcaaaggactccctgcaaaagtattttgggattaaaactggt
gagatgctctggaattacagtagaggaatggataatcggcttgttgggatgattcaggag
agcaagtctgtgggggctgaagtgaactggggtgtaagattcagggatcttcaacatgct
cagcatttccttttagacctttgcaaagaggtctcgttacgcttgcaagggtgtggggtg
caagggcgtactttcacacttaagataaaaaagagaagaaaagatgctggagagcctgca
aagtttatgggctgtggagactgcgaaaacctgagccatagcacaacggttccacttgct
actgatgatattgaagtgcttcagaggatttcaaagcagctctttggatctttccacata
gatgtcaaggacatccggggtgttggtttgcaagtttcaaggcttgaaagcgcagatact
tctaggcaagcacctgaaagaaactctttgaaatcatggctcatgtctgcatcagcgagt
tcaaagcaacaatttgatatcaatagaatagccaaagaatgtgttgattctgaaggaaag
agtgtgggtggaaattcaggtgtgttacgcattgcttcagtggagaattctgttcatgag
acaaataatgcacccaatggtgaggggggttctaaccagagctcaagtgtcccaccttta
tgccaccttgacatgggagtagtggagaatcttccttcagagctcctctcagaattaaat
gaaatttatgatggaaagctagttgaattgattaccaaaagaaaagtacaaggtgacaaa
agcactggatctgcatgcttctttcctcctgaaccagcccaagttgcagtagaggaagca
gaaagatcccgtaattctgcttctgtttcattgagaagaacagcattggaaatgaagggc
acacaacatatattggaggaactgcggatggtgccagactctgaggcaagacccgatagt
gttgcaatttccactgcaggacttgaaaataatgatttagtgccttcatctctgagccaa
gtagacacatctgtgttacagcagctgcccgaggaattgagagctgacatatttgaggca
cttcctgcgcacaggatgccagaaggtactgccctgggcccgaggacagataacatgcat
cctcctttgggcatcaagactgctactgacaatcaacctggatcaactgattctggtttg
agcaacaatctctggattggagatcctcctctttgggttgataagtttaaagtcagcaaa
ttgtcaacattgaatttttttgttgacatgtattacaaagcaaattcagctgagagttta
tcttcgatactacaatgcattattgctgaatccctacatcctttaaatgcaagatgtgat
gcttggaatgaagctattcacagcttcagtgagcttctcatgaattatattaaactgaag
atagtagtagatattgaggagatctatgtttgttttcgtcttctaagaaggttaagtacc
aagtcacagttcttcttggaagtgtacaatttggtctttccccaccttcaggcgtctgtc
gatgaaaactatagtggaaccttgcatatacctccaatcaagtag

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