Gossypium hirsutum (upland cotton): 107922225
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Entry
107922225 CDS
T04793
Name
(RefSeq) probable GMP synthase [glutamine-hydrolyzing]
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
107922225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ghi03400
]
107922225
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
107922225
DNA repair and recombination proteins [BR:
ghi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
107922225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
DUF2226
Motif
Other DBs
NCBI-GeneID:
107922225
NCBI-ProteinID:
XP_040943044
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All DBs
Position
D01:14966583..14979235
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AA seq
405 aa
AA seq
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MCTSKAKVTTGTTHVEITPPAVARINGRPVLQPTCNRVPSLDRRNSLKKIPPISPPPPAS
LPFTPSATSTTTVANGSRARASLTLPLSPSSKFTTKRGSDPNALNSSSEKVAIPRNTTKT
LDRKKSKSFKEGMGNNGLSSYIEPSLSYSSSLLVEAPGSIAAVRREQVALQQAQRKMKIA
HYGRSKSAKFESKVVPLDNTKPAEEKKRCSFITPNSDPIYVAYHDEEWGVPIHNDSMLFE
LLVLSGAQVGSDWTSILKKRQDFRDAFSGFDAETVANFTEKQMTTISSEYGIDISRVRGV
VDNSNLLEVKREFGSFDKYIWGFVNHKPMSTQYKFDHKIPVKTSKSESISKDMVRRGFRF
VGPTVVHSFMQAAGLTNDHLITCHRHLPCALLAIQRPPVHSLPDL
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgtgtacctctaaggctaaggtgaccacaggcactactcatgttgaaataacaccacct
gctgtcgcccggatcaatggccgtcctgtccttcaacctacttgtaatcgtgttcctagc
cttgatcgtcgtaattccttgaaaaaaataccacccatctctcctccaccacctgcatca
ctaccatttacgccgtcagccaccagtactacaactgttgccaatggtagcagggctagg
gcctcactcacactgcctttatcgccaagctcaaagttcaccaccaagcgagggagtgat
cccaatgcgttgaactcaagttctgaaaaggttgccattcccagaaacaccacaaaaacc
ttggataggaagaaatccaaaagtttcaaagagggtatggggaataatggattatcttct
tatattgagccatcattgagttactcttcttctctgctggttgaggctccaggaagcatt
gctgcagttagaagggaacaggtagctcttcaacaagcacaaagaaagatgaaaattgca
cactatggaagatcaaaatcggccaaatttgaatctaaggttgttcctctcgacaatacc
aagcctgccgaggaaaagaagaggtgcagtttcattacgcccaactcagatcctatctat
gtggcttaccatgacgaagaatggggagttccaatccataatgatagcatgctcttcgag
ttgttggttctaagtggtgctcaagtaggctcggattggacttcaatcctgaagaaacgt
caagatttcagggatgcattttcagggtttgatgcagaaactgtagccaacttcactgaa
aaacaaatgaccacaattagctctgaatatgggattgacataagcagagttcgaggtgtt
gtggacaactccaaccttctcgaggttaagagggagtttggatcatttgacaaatatata
tggggatttgtgaatcacaagccgatgtcgacgcaatacaaattcgatcacaagatccca
gttaagacatcaaagtctgagagcataagcaaggacatggtgagaagggggtttaggttt
gttggaccaacggtggtccattccttcatgcaagccgctggtctaaccaacgaccacctc
atcacatgccacaggcaccttccttgcgccttgttagccatccaaaggccaccggtccac
tcactccctgatttgtag
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