Gossypium hirsutum (upland cotton): 107922823
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Entry
107922823 CDS
T04793
Name
(RefSeq) ABC transporter B family member 4-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
107922823
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ghi02000
]
107922823
04147 Exosome [BR:
ghi04147
]
107922823
04090 CD molecules [BR:
ghi04090
]
107922823
Enzymes [BR:
ghi01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
107922823
Transporters [BR:
ghi02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
107922823
Exosome [BR:
ghi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
107922823
CD molecules [BR:
ghi04090
]
Proteins
107922823
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_29
AAA_16
ABC_ATPase
AAA_21
RsgA_GTPase
AAA_15
Zeta_toxin
SbcC_Walker_B
AAA_24
DUF815
DEAD
AAA_30
AAA_7
DLIC
Motif
Other DBs
NCBI-GeneID:
107922823
NCBI-ProteinID:
XP_016708503
UniProt:
A0A1U8L1G7
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All DBs
Position
A12:complement(83785443..83791787)
Genome browser
AA seq
1276 aa
AA seq
DB search
MATENGFNGDTNLHKASTSKSQETSKGDEKTNTVPFHKLFVFADSTDILLMIVGTVGAVG
NGLCMPLMTILFGDLVNAFGQNQSNNQVVHVVSKVSLKFVYLAVGAGVAAFLQVSCWMVT
GERQAARIRGLYLKTILRQDIAFFDVETNTGEVVGRMSGDTVLIQDAMGEKVGKVLQLLS
TFFGGFTIAFVKGWLLTLVMLSSIPLLVLSGATMAVIISKMATRGQTAYAKAATVVEQTI
GSIRTVASFTGEKQAISNYNKFLVTAYKSGVHEGTAAGLGLGVVLLIIFCSYSLAVWFGG
KMILEKGYTGGVVVNVIIAVLTGSMSLGQASPCMSAFAAGQAAAFKMFKTINRKPEIDPY
DMSGKVLEDIHGDVELRDVYFSYPARPEEQIFSGFSLSIPCGTTAALVGESGSGKSTVIS
LIERFYDPQAGEVLIDGINLKDFQLRWIRGKIGLVSQEPVLFTSSIKDNIAYGKEDATIE
EIQAAAELANAAKFIDKLPQGLDTMVGEHGTQLSGGQKQRVAIARAILKDPRILLLDEAT
SALDAESERVVQEALDRIMGNRTTVIVAHRLSTVRNADTIAVIHRGKMVEKGSHSELLRD
PEGAYSQLIRLQEVNKESEQVADLSEVTPESFRQSSLRRSMKRSISRGSSIGNSSRHSFS
VSFGLPTGMNVNDSATVDTEDPSKQPLKQPLEVPIRRLAYLNKPEIPVLLLGTIAAVANG
VILPIYGLLLSHVIETFFKPPDELKKDTRFWALIFMALGLASLLASPARTYFFSIAGCKL
IQKIRLMCFSKVVHMEVGWFDEPDNSSGSIGARLSVDAASIRGLVGDALAQMVSNLASAI
AGLVIAFVASWQLALIMLGLVPLIGFTGYFQANFMKGFSADAKMMYEDASQVANDAVGSI
RTVASFCAEEKMMQLYSKKCEGPLQTGIKQGLISGSGFGLSFFFMFAVYATNFYAGAQLV
KHGHVTFSDVFQVFFGLTMATIGITQSSSFAPDSSKAKSAAASIFAIIDRESKIDPSDES
GTTLENVKGDIELHHVSFKYPLRPDIQIFRDLSLSIHAGKTVALVGESGSGKSTVISLLQ
RFYDPDSGHITLDGVEIQNLQLKWLRQQIGLVSQEPVLFNETIRANIAYGKGGNATEAEI
LAASELANALKFISSLQQGYDTVVGERGVQLSGGQKQRVAIARAIVKSPKILLLDEATSA
LDAESERVVQDALDRVMVNRTTVVVAHRLSTIKNADVIAVVKNGVIVEKGKHDTLINIKD
GIYASLVALHMSASAS
NT seq
3831 nt
NT seq
+upstream
nt +downstream
nt
atggctactgagaatggctttaatggtgataccaacctgcacaaggccagcacatcaaaa
agccaggaaaccagcaaaggagatgagaaaaccaacactgttccgtttcacaaattgttt
gtgttcgcagattcaaccgatatcttgttaatgatcgttggtacagtcggtgcggtcggg
aacggtttatgtatgccccttatgacaatcttattcggagatcttgttaacgcttttgga
caaaaccagagtaataaccaagtggttcatgtggtctcaaaggtttctttgaaatttgtc
tacctcgcggttggggccggggtggcggcatttctccaggtgagttgctggatggtcaca
ggtgagagacaagctgctcgaataaggggcttgtacttgaaaaccatattgagacaagat
attgctttctttgatgttgaaacaaacacgggagaggtcgttggacgtatgtctggtgac
acagttctcatacaagatgccatgggagaaaaggttgggaaggttttacaattgctgtcc
acattctttggaggtttcactatagcatttgtcaagggatggcttctaactcttgtcatg
ttgtcatctatccctctccttgtattatctggtgcaacgatggctgtcattatatctaag
atggcaactcgtggacaaactgcttatgctaaagctgccaccgttgttgaacagacaatt
ggttcaattagaactgttgcatcatttactggtgagaagcaagccataagcaattacaac
aaatttcttgttacggcttataaatcaggtgttcatgagggaactgctgctggactcggt
ctcggtgtagtcttgttgatcatattctgcagttattctttggctgtatggtttggtggg
aagatgattttggagaaagggtacactggtggtgtagtagttaatgtgattatcgctgta
ttgaccggttcaatgtccctggggcaggcatcaccatgcatgagtgcatttgctgctggt
caagctgcggcatttaagatgttcaagaccatcaataggaagcctgagatcgacccatac
gatatgagtgggaaagtgttggaggacattcacggggatgtggaattgagagatgtttat
ttcagttatccagccaggccagaagagcaaattttcagtggattctctctttctattcca
tgtggtacaacagctgctttagttggagaaagtggaagtgggaaatcaactgtaattagt
cttatagaaaggttttatgatccacaagccggtgaagtgcttatcgatggcattaacctc
aaagatttccaacttagatggatcaggggaaagattggccttgttagccaagaacctgtg
ttgtttacatcaagcattaaggataatattgcatatggaaaagaagatgcaaccatagaa
gagatacaagccgcggctgaacttgcaaatgctgctaagttcatcgataaactacctcag
gggctagataccatggttggagagcatgggactcagctttctggtggacagaagcagaga
gttgcaatagcaagagcaattctaaaggaccctcggattttgcttttagacgaagctaca
agtgcattagatgcagaatctgaaagagtggtacaagaggcattggaccgcataatgggc
aataggactacggtcatcgttgctcatcgtttgagtaccgtgagaaatgcagatacaatt
gccgtaattcatcgaggaaagatggttgaaaaagggtcacattcagaactactcagggat
cccgagggagcgtactctcagcttattcgattacaagaagtaaataaagagtcagaacag
gtagcagatttgtcagaagttaccccagaatcatttagacagtcaagcctgagaagatca
atgaagcgatcaatcagtaggggatcatctataggaaatagcagccgccattctttctct
gtatccttcggtttgcctactggaatgaatgtcaatgattctgcaacagtagataccgaa
gacccttccaaacagccattaaagcagcctctagaggttcctatccgtcggctagcttac
ctcaacaagccagagattcctgttctcctacttggaactatagccgctgttgccaatggt
gtcatactgccaatttatggtctgctgctttcccatgtaatcgaaacattctttaaacca
cctgatgagttgaaaaaggatacgagattctgggcactgatatttatggcccttggcctg
gcatcattattggcatctccagcacgaacatactttttctccattgctggatgtaaacta
atccaaaaaataagattaatgtgtttttcgaaggtggttcacatggaagttggttggttt
gatgaaccagataattccagtggttcaatcggtgcaaggctctcggttgatgcagcctca
atacgtggtctagttggagatgcactagctcagatggtatcaaaccttgcatcggccatt
gctggtttggtcattgcttttgttgcaagttggcaattggcacttataatgctaggtcta
gtccctttgataggattcactggatattttcaagcaaatttcatgaagggatttagtgca
gatgcaaagatgatgtatgaagacgcaagccaagttgctaatgatgctgtcgggagtata
agaacagtagcttcattttgtgcagaggaaaaaatgatgcaactctatagcaagaaatgc
gagggtccattgcaaacagggattaagcaagggttgattagtggatcaggatttggactg
tcattcttttttatgtttgctgtttatgctaccaatttctatgccggagctcagcttgtc
aagcacggtcacgtaacattctcagatgtttttcaagttttctttggtttgacaatggcg
actattggaattactcaatcaagctcctttgctcctgattccagcaaagccaagtcggct
gctgcttccatatttgcaattatagaccgcgagtctaagatagacccgagcgatgagtcc
gggacaacactagaaaacgtgaagggagatatcgagcttcatcatgttagtttcaagtat
ccattaaggccagacattcaaattttccgagacttgagtttgtctatccatgctggcaag
actgttgctttggttggagaaagtgggagtgggaaatccacagtgatttcattattgcag
agattttacgatcctgattcgggacatatcactcttgatggagttgaaatccaaaacctc
caattaaagtggttgaggcaacaaatcgggcttgttagccaagaacctgttttgtttaac
gaaacaatccgtgccaacattgcatacggaaagggaggaaatgcaaccgaggcagaaatc
ttagctgcatcagagttggccaatgctctcaagttcataagctcattacaacagggttac
gatacggtagtaggagagcgaggtgttcaattatcaggaggacaaaagcaaagggtagcc
attgcacgagccatagttaaaagtccgaagatacttctcctagacgaggcaacaagtgcg
ttggatgccgaatcagagagggtggttcaggatgcattagatagagtcatggtgaaccgc
acaacggtggtggttgctcatcggctgtcgacaataaaaaatgcagatgtgattgcagtg
gttaaaaatggtgtcattgtagagaaaggaaaacatgacaccttgataaatatcaaagat
ggtatttatgcttctttggttgcacttcacatgagtgcttccgcttcataa
DBGET
integrated database retrieval system
