Gossypium hirsutum (upland cotton): 107924409
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Entry
107924409 CDS
T04793
Name
(RefSeq) sphingosine kinase 1-like isoform X1
KO
K04718
sphingosine kinase [EC:
2.7.1.91
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00600
Sphingolipid metabolism
ghi01100
Metabolic pathways
ghi04148
Efferocytosis
Module
ghi_M00100
Sphingosine degradation
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
107924409
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
107924409
Enzymes [BR:
ghi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.91 sphingosine kinase
107924409
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Motif
Pfam:
DAGK_cat
YegS_C
CERK_C
Motif
Other DBs
NCBI-GeneID:
107924409
NCBI-ProteinID:
XP_016710339
UniProt:
A0A1U8LB19
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Position
D05:complement(14956888..14960614)
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AA seq
489 aa
AA seq
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MDQRSDSENLSPFISDRVLVNGKVVPLTFTRDGKLRWNHNDRRCLNVEKEALGFTFEGSR
IRVNVVVEKRDRILCFANMGGIGRQSFVFEPLSEESLTLWSQKLRDYIDSLGRPKRLLIF
VNPFGGKKCATKIFVEDVRPCLEDADIQFTVIETKHQLHAKEVVKTLDLSKYDGIVCVSG
DGILVEVINGLLERADWSDAIKMPIGMVPAGTGNGMVKSLLDSAGEICSPSNAILAVIRG
HTRSLDVATISQGKTRFFSVLMLAWGLIADIDIESEKYRWMGSARIDFYALQRITYLRHY
NGRVSFVPAPGFEEYGEQTSYSGEPSCETSTSQQESLNIQQPGYLGSDVKLENMHWRTIS
GPFVSIWLHNVPWGSEDVLAAPNAMFSDGYLDLIIVKDIPKLSLLSLLSKMNDGSHVHCP
HVMYLKVKAFVLEPGARIDDPTKEGIIDSDGELLARGNVTYKGNVKCYMAYDKLQITVDQ
GLATLFAPV
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggatcaacgtagtgattcagagaacctctcacccttcatatcagaccgagtcctcgtc
aacgggaaagtggttcccctgacgttcaccagagacgggaagctccggtggaaccataac
gaccggcggtgcttgaacgttgagaaggaagctctcggattcaccttcgaaggttctaga
atccgagtcaatgtcgtcgtcgaaaagagagatagaatcctctgtttcgcgaacatggga
ggtatagggaggcagagtttcgtgttcgagcctctctctgaggaatcgctcactctctgg
tctcagaagcttcgtgattatattgattctctcggtaggccaaagagactattgatattt
gtgaacccgtttggagggaagaaatgtgcaactaaaattttcgtagaagatgtaagacct
tgccttgaagatgctgatatacagtttactgtcatagaaactaaacatcagctgcatgct
aaagaagttgtcaaaaccttggatttatcaaaatatgatggaattgtttgtgttagtggc
gatggaatccttgttgaggtgataaatggattacttgaaagagcagattggagtgatgca
ataaagatgcctataggaatggttcctgctggaacgggaaatggcatggtgaagtctttg
ctggattcagctggtgaaatatgtagcccatctaatgccattcttgctgttatcagaggg
catacacgttcgttggatgtagctactatctcgcaagggaaaacaagattttttagtgtc
ttgatgcttgcatggggtctgatagcagacattgacatcgaatctgaaaagtatagatgg
atggggagtgctcgtattgatttctatgctcttcaacgtataacatatttaaggcattac
aatggacgtgtttcttttgtgcctgctcctggctttgaagagtatggcgagcaaaccagt
tattctggtgaaccttcctgtgaaacaagcacaagtcaacaagagtcccttaacattcaa
cagcctgggtaccttggatccgatgttaagttggagaacatgcattggaggactattagc
ggaccatttgtttcaatctggcttcataatgtaccgtggggaagtgaagatgtcctggct
gcacccaatgcaatgttctcggacggttatttggatttgattatcgtaaaggacatcccg
aaattatccttgctgtcattactatcaaaaatgaatgatgggagtcatgtccattgtcca
cacgttatgtaccttaaggtgaaggcatttgtgttggagcctggtgctcgaatcgatgat
ccaacgaaggaagggatcatcgactcagatggtgagctacttgccaggggaaatgtaaca
tacaagggtaatgtaaagtgctatatggcgtacgataagcttcaaataaccgtggatcaa
ggtttagctactttgtttgcacctgtatag
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