Gossypium hirsutum (upland cotton): 107925235
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Entry
107925235 CDS
T04793
Name
(RefSeq) ABC transporter B family member 9-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
107925235
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ghi02000
]
107925235
04147 Exosome [BR:
ghi04147
]
107925235
04090 CD molecules [BR:
ghi04090
]
107925235
Enzymes [BR:
ghi01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
107925235
Transporters [BR:
ghi02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
107925235
Exosome [BR:
ghi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
107925235
CD molecules [BR:
ghi04090
]
Proteins
107925235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
Zeta_toxin
AAA_29
AAA_22
AAA_16
AAA_21
RsgA_GTPase
AAA_15
APS_kinase
DUF87
AAA_24
DEAD
AAA_30
DLIC
AAA_25
EMC3_TMCO1
Motif
Other DBs
NCBI-GeneID:
107925235
NCBI-ProteinID:
XP_016711367
UniProt:
A0A1U8L9T5
LinkDB
All DBs
Position
D10:complement(2834072..2839899)
Genome browser
AA seq
1295 aa
AA seq
DB search
MEVDTADGSTMKRGEAADKEEDKNKNNGSNKKKKTSADDQKVPFYKLFSFADRLDMFLVT
VGTIAAIANGLTQPFMTLIFGQMINSFSGADQSGVVKAVSKIAVKFVYLGVYACITSFLQ
VSCWMVTGERQAARIRGLYLKTILRQDIGFFDTETSTGEVIGRMSGDTILIQEAMGEKVG
KFIQLVSAFIGGFIIAYVKGWQLALVLSACIPLVVLAGGTMAMIMAKMSSRGQVAYAEAG
NVVEQSVGAIRTVASFTGEKFAIEKYNDKLQIAYSATVHQGLVSGLGLGVMLLVVFSTYG
LAVWFGAKLIVHHGYNGGQVINVILAIMTGGMSLGQTTPSVNAFASGQAAAYKMFETIKR
KPTIDPYDMSGVMLEDIQGEIELKDVYFRYPARPDVQIFAGFSLHVPSGTTVALVGQSGS
GKSTVISLLERFYDPDSGQVLIDGVDLRELQLQWIRGKIGLVSQEPILFATTIRENIAYG
KDNATNEEIKAAIEMANAAKFIDKLPKGLDTMVGEHGTQLSGGQKQRIAIARAILKDPKI
LLLDEATSALDAESERIVQDALVRVMTNRTTVVVAHRLTTIRNADMIAVVHLGKLVEKGT
HEELIGDPEGAYSQLVRLQEGTKEGGDALGKEAEQSDVTTDIEKDISRSGSQRLSASLIR
SISRSASSSRQSFTYNFGVPGLANFAETEETGVESNVPEETKIERRKSVSIRRLANLNKP
EVPVLLIGSIAAAVHGLVFPIFGLLFSSAIKTFYEPPSKLLKDSKVWAVSYVGMGVVILL
VGPMQNFFYGVAGGKLIQRIRSLMFEKVVHQNISWFDDPENSSGAIGARLSTDASTVRNL
VGDSLALIVQNIATIIAGLVIAFTANWILAIAILAVMPFTLIQGYLQTKFLKGFSADAKL
MYEEASQVANDAVGGIRTVASFCSEKKVMGLYQEKCQAPMKQGVRLGLVSGSGFGFSFFA
LYCTNAFCFYLGAVLVKHGKATFEEVFKVFFALTVSAIGVSQTSALAPDTNKAKDSAASI
FEILDRKPPIDSSSEDGSTIPTVTGNIELEHVSFKYPTRPDIQIFKDLCLSIPSGKTVAL
VGESGSGKSTVISLIERFYDPDSGCVMLDGIDIRKIKISWLRQQMGLVSQEPILFNETIR
TNIAYGKQGNATEEEIIAATNATNAHVFISSLPHGYDTSVGERGIQLSGGQKQRIIIARA
ILKDPKILLLDEATSALDAESERVVQEALDAVMVNRTTVVVAHRLSTIKGADIIAVVKTG
VIVEKGRHDTLMNITDGAYASLVALHLTSSVDTIR
NT seq
3888 nt
NT seq
+upstream
nt +downstream
nt
atggaggttgatactgctgatggatcaacaatgaagaggggtgaagcagctgacaaagaa
gaagataaaaacaagaacaatggcagtaacaagaagaagaagacatctgctgacgatcaa
aaagtgccattttacaagcttttttcatttgcagatagattggatatgttcttggtaaca
gtaggaaccatcgcggctattgctaatggcttaactcaacccttcatgacgctcattttc
ggtcaaatgatcaattctttctccggtgcagatcaatccggtgtcgttaaagcagtctca
aagattgcagtcaagtttgtctacttgggggtttatgcctgcattacttcatttctacag
gtatcatgttggatggtgaccggggaaagacaggccgcccgcattcgtggcttgtattta
aaaaccattctcagacaagacattggtttctttgacactgaaacatcgaccggtgaagtc
attgggaggatgtcgggtgacactatcctcattcaagaggcaatgggcgagaaggttggg
aagtttatacaactagtatcagctttcattggtgggtttataatagcttatgtaaaagga
tggcaactagcactagttctatcagcctgcatcccacttgttgtccttgctggtggaacc
atggccatgataatggctaaaatgtcgagcagaggacaggttgcttatgctgaagctgga
aacgtagtggaacaaagcgttggggccattagaacagtcgcatcatttaccggcgagaaa
ttcgctatcgaaaaatataatgataagctacagatcgcctatagtgccaccgttcaccaa
gggctggtttcaggcctaggacttggtgtaatgttgcttgttgtgttttctacttatgga
ttagctgtatggtttggcgctaaattgatagtacaccatggatataatggcggacaagtc
attaatgttatattagcaattatgacaggaggaatgtcgttgggacagacaactccgagt
gtaaatgcgtttgcatctgggcaagctgcagcgtataagatgttcgagactattaaaaga
aaaccgacgattgatccgtacgacatgagtggagtaatgctggaagatatccagggtgaa
atagaacttaaggatgtctatttcaggtaccctgcaagaccagatgtgcagatatttgct
ggtttttcgttgcacgtaccgagtggtacaactgtggccttggttggacaaagtgggagt
gggaaatcaacggtgattagccttttggagagattctatgaccctgattctggccaagtt
cttatcgatggcgttgatttgagagagttgcagcttcaatggatacgggggaaaatcggg
cttgtcagccaagaacctatattgtttgcaacaactatcagggaaaacattgcatatgga
aaggacaatgccactaatgaagagattaaagcagcaattgagatggctaatgctgctaaa
ttcattgacaagttgcccaaggggcttgacaccatggtgggggagcatggaactcaactt
tcaggcgggcaaaagcaacgaatagctatagcaagagccattttaaaggatccaaaaatc
ctcctcctcgatgaggctacgagtgcgctggatgcagagtcggaacggattgttcaagat
gcactagtgagagtgatgactaatagaacaactgtggtggtggcacatcgattgacgact
atcaggaatgctgacatgatagcggtggtgcatttagggaaacttgtggagaaaggaact
catgaggagttgatcggagatccagaaggggcttattcccagttagttcgtttgcaagag
ggaactaaagaaggcggtgatgctcttgggaaggaagccgaacaatctgatgtaaccaca
gatatagagaaggacattagtcggtccggaagccagagactgagtgcatctctgataagg
tccataagcagaagtgcatcatcaagccgacaatccttcacatataatttcggtgttccc
ggtcttgctaactttgccgagacagaagaaacaggcgtagagagcaatgtaccagaagaa
actaaaatcgaaagacgcaaaagtgtttcaattagacggctggcgaatcttaacaagcct
gaggtacctgtcctattgattggatccattgctgctgctgtacatggactggttttccca
atatttggtctccttttctcatcagccattaaaacattctatgaaccaccaagtaagctg
ttaaaggattccaaggtgtgggcagttagttacgttggaatgggtgtggttattctattg
gtcggaccgatgcagaatttcttttacggagttgcaggcgggaaattgatccaaagaatc
cgttccttgatgttcgagaaagtagtccaccaaaacatcagttggttcgacgatcctgag
aattcgagtggcgccatcggtgcgagactgtccaccgatgcatcgactgtaagaaacctt
gtcggtgatagcttggccctgattgtacaaaacatagctactatcatagcaggattagtc
atagcatttactgctaactggatattagctatagcaatcctagctgtcatgccatttaca
ttaattcaaggatacctgcagaccaaatttctcaagggattcagtgcggatgcaaagttg
atgtatgaagaagcaagccaagtagctaatgatgcagtaggaggtataagaactgttgct
tcattttgttcagaaaagaaggtgatgggtttataccaagagaaatgccaagccccaatg
aagcaaggagtccgtctcggactcgtaagcggttccgggtttggtttctctttctttgct
ctatactgcacaaatgccttttgtttttaccttggagctgtactagtgaagcatgggaaa
gcaacatttgaagaagtattcaaggttttctttgcattaacggtgtcagccattggtgtt
tcacaaacaagtgctttggctcctgataccaataaagccaaagattcagcagcttcaata
tttgagattcttgatagaaaaccccccatcgattcaagcagtgaagatggttccacaata
cctaccgttacaggcaacattgagttggaacatgttagtttcaagtacccaacacgacca
gacattcaaatattcaaagatttgtgtctcagcataccttctggaaagactgttgcactt
gttggtgagagcgggagtgggaaatcaaccgtgattagcctcattgaaaggttttacgat
ccagactctggttgtgtaatgttggatggcattgatattaggaagataaaaataagttgg
cttaggcaacaaatgggattggttagccaagagccaatacttttcaatgagaccatacgt
accaacatagcctatggcaaacaaggaaatgcaaccgaagaagagatcattgcagctacg
aacgcaacgaatgcacatgtgtttatcagttcgttgccgcacggttacgacacttcggtc
ggagaacgggggattcagttgtccggcgggcaaaaacagcgtataatcattgctagagcc
attttgaaggaccccaagatccttttgcttgatgaggcaacaagtgctttagacgcagaa
tccgagcgtgtggtgcaggaggcattggacgcggttatggtgaacagaacgactgttgtt
gttgctcatcgccttagcacgataaagggtgctgatattatcgcggtggtgaaaaccgga
gtcattgttgagaaaggtcgacacgatacgttgatgaatattaccgatggggcttatgct
tccttggtggcacttcacttgacatcttcggtagacacgatacgttga
DBGET
integrated database retrieval system
