KEGG   Gossypium hirsutum (upland cotton): 107928403
Entry
107928403         CDS       T04793                                 
Name
(RefSeq) uncharacterized protein LOC107928403
  KO
K03873  elongin-B
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    107928403
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ghi04121]
    107928403
   03400 DNA repair and recombination proteins [BR:ghi03400]
    107928403
Ubiquitin system [BR:ghi04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul2 complex
    Adoptor protein
     107928403
   Cul5 complex
     107928403
DNA repair and recombination proteins [BR:ghi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     107928403
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Dsc3_N Ubiquitin_5 Ubiquitin_2 Rad60-SLD_2
Other DBs
NCBI-GeneID: 107928403
NCBI-ProteinID: XP_016715116
UniProt: A0A1U8LKJ0
LinkDB
Position
D08:67941515..67945890
AA seq 103 aa
MAMYIRVKRSKTTYFIQCDPTETTLDIKQKLHTLIDQPVNDQRLILMSNGDILEDSKTLA
DQKVENDAVVALTLRKDDNEFEDVNIVKPNDFYQSRDTDSGNW
NT seq 312 nt   +upstreamnt  +downstreamnt
atggctatgtacatccgtgtgaagcgtagcaagacaacatactttatccagtgtgatcca
actgaaactaccctagacattaagcaaaagttgcataccctcattgatcaacctgttaat
gatcagcgtttgatccttatgagtaatggggatatattagaggattcaaaaactttggca
gaccagaaggttgaaaatgatgctgttgtggcactgaccttgagaaaagatgacaacgag
ttcgaggatgtcaacatagtaaaaccaaacgatttctaccaatctcgtgacacagatagt
ggaaattggtaa

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