Gossypium hirsutum (upland cotton): 107929168
Help
Entry
107929168 CDS
T04793
Name
(RefSeq) 3-isopropylmalate dehydratase large subunit, chloroplastic
KO
K01703
3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:
4.2.1.33
4.2.1.35
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00290
Valine, leucine and isoleucine biosynthesis
ghi00660
C5-Branched dibasic acid metabolism
ghi00966
Glucosinolate biosynthesis
ghi01100
Metabolic pathways
ghi01110
Biosynthesis of secondary metabolites
ghi01210
2-Oxocarboxylic acid metabolism
ghi01230
Biosynthesis of amino acids
Module
ghi_M00432
Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
107929168
09105 Amino acid metabolism
00290 Valine, leucine and isoleucine biosynthesis
107929168
09110 Biosynthesis of other secondary metabolites
00966 Glucosinolate biosynthesis
107929168
Enzymes [BR:
ghi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.33 3-isopropylmalate dehydratase
107929168
4.2.1.35 (R)-2-methylmalate dehydratase
107929168
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aconitase
Motif
Other DBs
NCBI-GeneID:
107929168
NCBI-ProteinID:
XP_016716026
UniProt:
A0A1U8LN41
LinkDB
All DBs
Position
D09:52755563..52760048
Genome browser
AA seq
510 aa
AA seq
DB search
MASSLASPSPTSSFIRNKKDLGVSAFPSTSQIAIQKCKKQASKKIVSVMAPQQSERKPAT
TGSVKTGMTMTEKILAKASEKPRLSPGDNVWVNVDILMTHDVCGPGSIGIFKKEFGQNAK
VWDREKIVIIPDHYIFTSDERANRNVDILRDFCTEQNIKYFYDIKDLSNFKANPDYKGVC
HVALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKLLLKVPPTLRF
VMDGEMPPYLLAKDLILQIIGEISVAGATYKAMEFVGTTVESLNMEERMTLCNMVVEAGG
KNGVVPADSTTFKYLEGKTSLPYEPVYSDAQASYLSEYRFDISKLEPLVAKPHSPDNRAL
ARECKDVKVDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWLDLYTLP
VPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEAKVCVSTTNRNFPGRMGH
KEGQIYLASPYTAAASALTGYVTDPREFLQ
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttctttggcttctccgtccccaacttcttcctttatcaggaacaagaaagat
ttgggtgtctctgctttcccttcaacatctcaaatcgccattcagaaatgtaagaaacaa
gcttcgaagaaaatcgtctcagtcatggcacctcagcaatcagagcgtaaaccagcgacc
acaggctctgtgaagactggaatgacaatgacggaaaagattcttgcaaaagcctctgag
aaaccacggctgagtcctggtgataatgtttgggttaatgttgatatattgatgacacat
gatgtttgtggtcctggttccattggtatcttcaagaaagaatttggtcaaaatgcaaag
gtttgggaccgtgaaaagattgttattatacctgaccattacatatttacaagtgatgaa
cgcgcaaatcggaacgtagatattttgagggatttttgcacagagcaaaatatcaagtat
ttttatgatataaaagatcttagtaattttaaggcaaaccctgattataaaggtgtatgc
catgttgcacttgcccaagaaggtcactgcaggcctggagaggttttgttagggacagat
tctcacacatgtactgctggagcattcggtcaatttgctacaggaattggaaatacagat
gcaggctttgtcttaggcaccgggaagcttctgctcaaggttccaccaacattgagattt
gtgatggatggtgaaatgcctccttatctgcttgcaaaggatttgattttgcagatcatt
ggtgaaatatctgtagccggtgcaacatataaagccatggagtttgtcggaacaacggtt
gaaagtctaaatatggaagaacggatgacgttatgcaacatggttgttgaagctggggga
aagaatggagttgttcctgctgatagtactacatttaagtaccttgagggtaaaacatcc
ctgccatatgaaccagtttacagtgatgcacaagcaagttatctttccgagtacagattt
gacatctcaaagttggagcccttggtggctaagccacattctcctgataaccgtgctttg
gcaagagaatgcaaagatgttaaagtagacagagtttatattggatcttgtactggtggt
aaaactgaagattttcttgctgctgctaaagtctttctagcttcaggaaagaaggtcaag
gttcctacattccttgtcccggctacacaaaaggtttggttggacttatatactctccct
gtacccggatctggtgggaagacatgctcccagatatttgaagaagctggctgtgacaca
cccgcaagccctagctgtggtgcttgtttgggtggcccgaaagacacatatgcacgtatg
aacgaagcaaaggtctgtgtctcaacaacaaaccggaacttccctggtcggatggggcac
aaagaaggccagatatatcttgcttctccgtatacagcagctgcatcagctttgaccggt
tatgtcaccgatccaagagagtttttgcagtaa
DBGET
integrated database retrieval system
