Gossypium hirsutum (upland cotton): 107929797
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Entry
107929797 CDS
T04793
Name
(RefSeq) sphingoid long-chain bases kinase 1
Organism
ghi
Gossypium hirsutum (upland cotton)
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Gene cluster
GFIT
Motif
Pfam:
DAGK_cat
YegS_C
CERK_C
Motif
Other DBs
NCBI-GeneID:
107929797
NCBI-ProteinID:
XP_016716799
UniProt:
A0A1U8LQD5
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Position
A12:1471817..1480568
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AA seq
768 aa
AA seq
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MQKSGSLSRSSNSPSVRVSSPPPPPSQQSVRRLSLCSQIATHSSPIVFPEKRTKKLKASS
KRSEAPVTDDQTDKSKGEEHRIDIGGDEKSDLLGYVVYTGKLILDKRKNTPNIANPADVE
QNSSTDIAKQESVAAKLTSKALVWGSHVLSLDDVISVSYNVGVRHFTVHSYPLKRGSYGL
SCFIKPKRSRKDFRFLASSVEEAVQWVGGFADQQCFINCLPHPLVSSKKQASSELFPIDA
PPELVFRCRNPPKMLVILNPRSGRGRSSKVFHGIVEPIFKLAGFKLEVVKTTSAGHAKKL
ASTVDISTCPDGIICVGGDGIINEVLNGLLSRDNQKEGISIPIGIIPAGSDNSLVWTVLG
VRDPVSAAISIVKGGLTATDVFAVEWIQTGIIHFGMTVSYYGFVSDVLKLSEKYQKRFGP
LRYFVAGFFKFLCLPTYNYEVEYLPAEKEDREGKTSADREVVDMSDLYTDVIRRSYIDGI
PRASSLSSIDSIMTPSRMSGGEMDTSSNMHASTEPSEYVRGLDPKTKRLSSSRSNVTAEP
EVIHPQLPLSSTLNWPRTRSKSRTDKGWSGLTAAHDPSRCSWGNAATNDREDISSTLSDP
GPIWDAEPKWDTEANWDVENPIELPGPSDDVDSGINKEVVPRLEDKWVLTKGPFLGIIVC
NHACRTVQSSQVVAPRAEHDDNTMDMLLVHGSGRLKLMRFFLLLQMGKHLSLPYVEYVKV
KSVKIKAGKHTHNGCGIDGEFFPLNGQVASSLLPEQCRLIGRFPDRHV
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagagtgggagtctgtcgagaagtagtaatagtccttcagtgagagtgtcgtcg
ccgcctccgccgccttctcagcagtcggtgaggcggctgagcttgtgctcccaaatagca
acccactcttccccaattgtgttcccagagaaacgtactaagaagctcaaggcttcctcc
aaacgcagcgaagcccctgtcacggatgatcagactgataaatctaagggggaagagcat
cgaatcgacatcggaggggatgaaaagtctgatttacttgggtatgtggtttacacaggg
aagctcattttggataagagaaagaataccccaaatattgctaatcccgccgatgtagag
cagaattcttctaccgatattgccaaacaagaatctgttgctgctaaactcactagcaag
gcgttggtttggggttcgcatgtcttgtctcttgatgatgttatctcggtatcttacaat
gtcggtgttagacatttcactgtgcattcataccctctaaaaaggggttcttatggcctt
tcatgctttattaaaccaaagagaagtcgaaaggattttcgattcttggcttctagtgtg
gaagaagctgttcaatgggttggtgggtttgcagaccagcaatgtttcatcaattgtttg
cctcaccctttagtttcttcaaagaagcaagcttcttctgaattgtttccaatagatgct
cctcccgagctcgtcttcaggtgcaggaatccaccaaaaatgctcgtcatattgaatcca
aggtcaggtcggggtcgttctagtaaagttttccatggaattgtcgaaccaatatttaag
cttgcagggtttaaattggaggttgtcaaaacaacatctgcaggccatgccaagaagctg
gcatctacagttgatatcagcacatgtcctgatggaataatatgcgttggtggtgatggc
attatcaacgaggttctaaatggtctgcttagtagagacaatcagaaagaaggaatttct
atacccattggaattataccagcagggtcggataattcactggtttggactgttcttgga
gttagagatcctgtctctgctgcgatttctattgtgaagggaggtcttacagctacagat
gttttcgctgttgagtggattcagactggtattattcactttggaatgacggtttcctat
tatggatttgtcagtgatgtcttaaagctttctgagaaatatcagaaacgatttggtcct
ctacgatattttgttgctgggttcttcaagtttttgtgtttgccaacatacaactatgaa
gtggagtaccttcctgcagagaaagaggatcgagaaggtaaaacctctgctgatcgggaa
gtagttgacatgtctgacctgtacacagacgttataaggaggtcatacatagatggcatt
cctagagcctcgagtttatctagtattgattcaataatgactcctagccgaatgtctgga
ggcgagatggacacttctagtaatatgcatgccagcactgaaccatctgaatatgtacga
ggccttgatcctaagactaaacggctgtcatctagcagaagcaatgtaacagctgagcct
gaagttattcatcctcagttaccactctcatcgactctaaactggccacggaccagatca
aaatcaaggacagataaaggatggagtggattgactgcagcacatgatccttcgagatgt
tcttggggtaatgctgcaacaaatgatagagaggatatatcttcaacattgtccgatcct
ggtccaatttgggatgctgaaccaaagtgggacactgaggctaattgggatgtggaaaat
ccaatcgagttaccagggccatcagatgatgttgattcaggaataaataaggaagttgtc
ccaagacttgaagataaatgggttttgaccaaggggccatttcttggcatcattgtgtgc
aaccatgcatgcagaactgtgcaaagttctcaggtggttgctccaagagctgaacatgat
gacaataccatggatatgctcttagttcatgggagtgggcggttgaagttgatgagattt
ttcttgctgctacagatgggtaaacacctttcactgccatatgttgaatatgtcaaggtg
aaatcagttaagattaaggctgggaaacacacgcataatggttgtggtattgatggtgag
tttttccccctcaatggacaagtggcatcatctttgcttccagaacagtgcagactaatt
ggtcgcttccctgaccgtcatgtataa
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