Gossypium hirsutum (upland cotton): 107930671
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Entry
107930671 CDS
T04793
Name
(RefSeq) beta-hexosaminidase 1-like
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00511
Other glycan degradation
ghi00513
Various types of N-glycan biosynthesis
ghi00520
Amino sugar and nucleotide sugar metabolism
ghi00531
Glycosaminoglycan degradation
ghi00600
Sphingolipid metabolism
ghi00603
Glycosphingolipid biosynthesis - globo and isoglobo series
ghi00604
Glycosphingolipid biosynthesis - ganglio series
ghi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
107930671
09103 Lipid metabolism
00600 Sphingolipid metabolism
107930671
09107 Glycan biosynthesis and metabolism
00513 Various types of N-glycan biosynthesis
107930671
00531 Glycosaminoglycan degradation
107930671
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
107930671
00604 Glycosphingolipid biosynthesis - ganglio series
107930671
00511 Other glycan degradation
107930671
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ghi03110
]
107930671
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
107930671
Chaperones and folding catalysts [BR:
ghi03110
]
Intramolecular chaperones
Others
107930671
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20
Glycohydro_20b2
Motif
Other DBs
NCBI-GeneID:
107930671
NCBI-ProteinID:
XP_016717868
UniProt:
A0A1U8LWT7
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Position
D10:62157724..62162330
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AA seq
544 aa
AA seq
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MLHLSEKPHFIYTCLMLLAWVSQYVSLSTGFELNHSLTYIWPLPHELTSGNETLTVNPTL
SLYLIGKGGNFKILREGFRRYKRIIFKQSSGVSIFKNLRRIRSIYDISQMRIIVNSDSDE
LKLGVDESYTLFITKTGGKSIAWEAIIEVNTVYGALRGLETFSQLCAYDYTTKSVQLSKA
PWYIKDKPRFAYRGLLLDTSRHYFPVDVIKSIIDSMSYAKLNVLHWHIIDKQSFPLEIPK
YPKLWNGAYTKWERYTVEDASKIVRFAKTRGIHVMAEVDVPGHAESWGVGYPDLWPSNSC
REPLDVTKNFTFDLISGIFSDIRKIFPFELFHLGGDEVNIGCWNNTPHVKQWLKDNNMKP
KDAYKYFVLKAQEIAISKNWTPVNWEETFNAFAGSLNPQTVVHNWLGPGVCPKAVAKGFN
CIFSNSGVWYLDHLDVPWEQIYNAEPLEGIDNESKQKLVLGGEVCMWSETVDTSNVQQTI
WPRAAAAAERLWSTKSALSAGNDTVLHRLHYFRCLLQRRGVQAAPVTNYYARQPPAGPDS
CYWQ
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgttgcatttgtctgaaaaaccccatttcatctacacttgtttgatgttattagcttgg
gtttctcagtatgtatctttaagtactgggttcgagttgaatcattcattgacttacatt
tggccgttgccacatgaactcacttccggcaatgagacactaactgtgaacccaacactg
tctttgtatctgattgggaaagggggaaactttaagattttgagggaaggatttaggaga
tataaaaggattatatttaaacaatcttctggggtttcgatttttaagaatttgagacga
attagatctatttatgatattagtcaaatgaggattattgtgaattcagatagtgatgag
ctcaaattgggtgtggatgagagttatactttgtttataacaaagactggagggaagtct
attgcttgggaggctataattgaggtgaataccgtttacggtgcgttaagagggttggag
acattcagtcaattgtgtgcttacgattatacgactaaatcagtgcaattatccaaagca
ccatggtacattaaagataagccaaggtttgcatatcgtggccttttgctcgatacatca
aggcactattttccagtcgatgtcattaagtcgataattgattcaatgtcttatgctaaa
cttaatgtccttcattggcacatcatagataagcagtcatttcccctcgaaatacccaaa
tatccaaaactgtggaacggtgcttatacgaaatgggagcgctatacagttgaggatgct
agtaaaattgttagatttgccaaaacacgaggcatccatgtaatggcagaagtagatgtc
cccggtcatgcagagtcatggggagtcggctatccagatctatggccttctaattcctgc
agagaaccacttgatgttacaaaaaattttactttcgatttaatttctggcattttttca
gatatccgaaaaatcttcccatttgagctcttccaccttggtggcgatgaggttaatata
ggttgctggaacaatacaccccatgtaaagcagtggctcaaagataacaatatgaagcct
aaagatgcatataaatatttcgtactcaaggctcaagaaattgcaatctcgaaaaactgg
accccggtcaactgggaagagaccttcaatgcttttgcagggagtcttaatccgcagacc
gtggtgcataactggttgggtcctggggtttgtccaaaggctgtcgcgaaaggattcaat
tgcattttcagtaattcaggtgtttggtatctcgaccatctagatgtcccttgggagcaa
atctacaatgccgaaccactagaaggaatagataacgagtccaagcaaaaacttgttctc
ggaggagaagtttgtatgtggagtgagacagttgatacatcaaacgttcaacaaacaatt
tggcctcgagctgctgctgcagcagaacgcttgtggagcacaaagtcggcattatcagca
ggaaatgatactgtattgcatcggttacattacttccgatgcctattgcaaaggcgtggg
gttcaagctgctccagtcacaaattattacgctcggcaaccgccagctggtcctgactca
tgttattggcaataa
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