Gossypium hirsutum (upland cotton): 107939078
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Entry
107939078 CDS
T04793
Name
(RefSeq) ABC transporter B family member 15-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
107939078
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ghi02000
]
107939078
04147 Exosome [BR:
ghi04147
]
107939078
04090 CD molecules [BR:
ghi04090
]
107939078
Enzymes [BR:
ghi01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
107939078
Transporters [BR:
ghi02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
107939078
Exosome [BR:
ghi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
107939078
CD molecules [BR:
ghi04090
]
Proteins
107939078
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
Zeta_toxin
AAA_21
AAA_22
RsgA_GTPase
AAA_16
AAA_30
AAA_15
ABC_ATPase
SbcC_Walker_B
AAA_23
AAA_28
DLIC
DUF6050
Motif
Other DBs
NCBI-GeneID:
107939078
NCBI-ProteinID:
XP_016727851
UniProt:
A0A1U8MLZ6
LinkDB
All DBs
Position
D04:9141724..9148512
Genome browser
AA seq
1249 aa
AA seq
DB search
MGNEKEKLKKINGSIRSIFMHADDVDMWLMTLGFIGAVGDGFSTPLVLLVTSKLMNNLGG
SSAFTADMFIHNINKNSMALLYLACWSWFACFLEGFCWSRTGERQATRMRARYLKAILRQ
DVGYFDLHVTSTAEVITSVSNDSLVIQDVLSEKVPNFLMNVAIFVGCYMVAFIMLWRLAI
VGFPFAVVLVIPGLMYGRGLIGIARKISEEYNKAGTIAEQAISSIRTVYSFVGESKTIAE
FSAALQVSVQLGLRQGLAKGLAIGSNGVVFATWSFMSYYGSRMVMYHNAPGGTVFIVAAA
IAKGGLSLGASLSNLKYFSEACAAGERIMKVMKRVPNIDSDNLEGEILEKVTGAVEFRHV
DFAYPSRPDTMVFKDLCLNIPAGKTVALVGGSGSGKSTVIALLQRFYDPLGGEILLDGIS
IDKLQVKWLRSQMGLVSQEPALFATTIKENILFGKEDASMDEVIDAAKASNAHNFISQLP
QGYETQVGERGVQMSGGQKQRIAIARAIIKAPRILLLDEATSALDSESEQVVQQAIDQAA
VGRSSIIIAHRLSTIRNADLIAVVQKGQVIEIGSHDQLMENDIGHYASLVHLQQIEKEKT
LDEANSNLSTCASSSISNIDIYSSSSHRLSFVSRSSSSNSFTQNHTLLAGESIVEEKKLP
VPSFRRLLVLNLPEWRQAIMGCLSAILFGAVQPVYAFSLGSTVSVYFLTDHNEIKEKTKI
YALCFLGLSVFTLLINVGQHYNFAYMGEYLTKRIRERMLSKILTFEIGWFDQDENSSGAV
CSRLAKDANALRSLVGDRMALIVQTMSAVTIACTMGMVIAWRLAIVMIAVQPIIIICFYT
KRVLLKSMSQKAIKAQGESSKLAAEAVSNLRTITAFSSQDRILKMLERAQEGPRRESIRQ
SWFAGIGLGTSQSLTTCTWALNFWYGGKLISQGYITAKALFETFMILVSTGRVIADAGSM
TSDLVKGLEAIGSVFAILDRFTTIEPEDSNGHNPEKITGHVKLHDIDFAYPARPNIMIFK
AFSLNIDAGKSTALVGQSGSGKSTIIGLIERFYDPLDGVVEIDGRDIRSYQLRSLRKHIA
VVSQEPTLFAGTIRENIAYGASDTMDESQIIEAAMAANAHEFISGLKDGYNTWCGDRGMQ
LSGGQKQRIAIARAILKNPAILLLDEATNALDSQSEKAVQDALERVMIGRTSVVVAHRLR
TIQNCDQIAVLHKGKIVEKGTHQSLLAKGPTGAYFSLVSLQRRPLLAHN
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atgggtaatgagaaggagaaactgaagaagataaacggatccataaggtcaattttcatg
catgcggatgatgtagatatgtggttgatgactcttggcttcatcggagccgttggtgat
ggtttttctacacctcttgtattgcttgttactagcaagttgatgaacaatcttggtggt
tcttcagctttcactgcagacatgttcattcataacatcaacaagaattcaatggcttta
ttgtatttggcttgctggtcttggtttgcttgttttctagaaggattttgttggtcaaga
acaggcgagagacaagcgacaagaatgagagccaggtatttgaaagctatcttaagacaa
gatgtgggatactttgatttgcacgttacaagcacagctgaagttatcaccagtgtttca
aatgatagtctagtaatccaagatgttctcagtgaaaaggtgccaaattttctgatgaat
gttgcaatatttgttgggtgttacatggtagcattcataatgctatggagactagcaata
gtggggtttccttttgctgttgttttggtgattcctggcttaatgtatggaagagggttg
ataggaatagctagaaagataagtgaggaatacaataaggctggaactatagcagaacag
gcaatatcttctataagaacagtttattcctttgttggtgagagtaaaaccattgcagaa
ttctcagcagctttacaagtgtccgtgcagttgggattaagacaaggcttggctaaaggt
cttgcaattggaagcaatggggttgtttttgccacttggtctttcatgtcgtattatggc
agtaggatggttatgtaccataacgctccaggagggactgttttcattgttgctgccgcc
attgccaaggggggcctatcattaggagccagtctatcaaacctcaagtatttctctgaa
gcatgtgcagctggggaacggattatgaaagtgatgaaaagagtccccaatattgattct
gacaatttggaaggagaaattttggaaaaagttacaggagcagttgaatttaggcatgtt
gactttgcatatccatcaaggcctgacaccatggttttcaaagatttatgcctcaacatt
ccggctggaaagactgtggctttagtgggtggtagtggctcagggaaatccacagtcata
gcactactacaaaggttttatgacccacttgggggagagatactgcttgacggaatttcc
atagataagctgcaggtcaagtggttaagatcacaaatgggtttggtgagtcaagagcca
gcactttttgctacaaccattaaggagaacatactttttggcaaggaagatgctagcatg
gacgaggttattgatgcggccaaagcctcaaatgcccacaatttcatatcccaattgcct
caaggttatgaaactcaggttggtgaaagaggggttcaaatgtctggtggacaaaagcaa
aggattgctatagcaagagcaataataaaagcacctcgaatccttcttctagatgaagca
acaagtgcactagactcagaatccgaacaagttgtgcaacaagcaatagaccaagctgcc
gttggccgcagctccataataatcgcccaccgcctttccaccattcgcaatgctgacctc
atagcagttgttcaaaagggccaggttattgaaataggatcgcatgatcagttgatggaa
aatgatatcggtcactatgcttcattagtccaccttcagcaaatagagaaagaaaagact
cttgatgaagctaactcaaatttatctacctgtgcatcatcttcaatatcaaatatagac
atttacagctcaagtagtcatagactttcttttgttagtcggtccagttcctccaattca
tttactcagaaccatactttattggctggagagtccatagtggaagagaaaaaattgcca
gtgccatcttttagaagattgttggtattgaacttaccagaatggagacaagcaataatg
gggtgtttaagtgctatcctatttggtgcagttcaacctgtttatgcattctcactagga
tctacggtatcagtgtattttctaactgatcacaatgagatcaaggagaagactaagatc
tatgccttatgctttctcgggttatcggtgtttacattgctgattaatgttggtcagcat
tataatttcgcatacatgggagagtacttgacaaagaggattcgagagaggatgctttca
aagatactcacatttgaaataggttggttcgatcaagatgagaattcaagtggtgctgtc
tgctctagacttgccaaggatgctaatgcgttgagatccttggtaggtgacaggatggca
ttgattgtgcaaacaatgtcagcagtaactatagcttgcaccatgggcatggtcatagct
tggcggcttgcaattgttatgattgcggttcaacccatcatcatcatttgtttctacacc
aaacgtgtcttgcttaaaagcatgtcacagaaggctattaaagcccaaggtgaaagcagc
aagctggctgctgaggcagtttccaaccttcgaaccatcaccgccttctcgtcccaagac
agaatcttgaaaatgctggaacgggctcaagaaggtcctcgaagagagagcatccgtcaa
tcgtggtttgctggtattggactcggcacgtctcaaagcctaacaacttgcacttgggcc
ttaaacttttggtatggtggtaaactcatctctcaaggctacatcactgcaaaagctttg
tttgagaccttcatgatcttggtaagcaccggccgggtgatagccgatgctggaagcatg
acttctgaccttgtcaagggcttagaagcaattggatcagtctttgctatattggaccga
ttcacaacgattgagcctgaagattctaacggacataatcccgaaaagataacaggccat
gtaaaacttcatgacatagactttgcatacccggctcggcccaacattatgatcttcaaa
gccttctccctcaacatagatgcgggtaaatcaactgcactggttggacaaagtgggtcg
ggtaaatcaacaatcattggattaatcgagagattttacgatccacttgatggtgtagtg
gaaattgatggtagagatataaggtcataccagcttaggtcactaaggaaacacatagca
gtagttagccaagagcctacattatttgcaggcaccataagagaaaacattgcatatgga
gcatctgatacgatggatgaatcacagatcatagaggctgccatggcagccaatgctcat
gaatttatttcagggttaaaagatggttacaatacatggtgtggtgataggggaatgcag
ctctctggggggcaaaagcagcgcattgcaatagcaagggccatactgaaaaaccctgca
attttgctcttagatgaggccaccaatgcacttgatagtcaatcagagaaagcagtacaa
gatgcacttgaaagggttatgattgggagaaccagtgtggtagtggctcacaggctaaga
accattcaaaactgtgaccaaattgctgtgttgcataaagggaagatagtggagaaaggg
acccatcaatctttgttggctaaaggtcccactggagcttacttctcattggttagcctc
caaaggagacccttgttggcacataattaa
DBGET
integrated database retrieval system
