Gossypium hirsutum (upland cotton): 107943811
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Entry
107943811 CDS
T04793
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 33B
KO
K27472
mediator of RNA polymerase II transcription subunit 33
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ghi03021
]
107943811
Transcription machinery [BR:
ghi03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
107943811
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Xpo1
Motif
Other DBs
NCBI-GeneID:
107943811
NCBI-ProteinID:
XP_016733116
UniProt:
A0A1U8N200
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Position
D08:5670220..5680602
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AA seq
1322 aa
AA seq
DB search
MEVGTVWESVLEQTKSAQDKNSDPLVWAVQLSSRLNSAGVSLPSIDLAHLLVSHICWDNH
LPITWKFLEKALTANFVPPMLVLALLSTRVIPKRKFHPTAYRLYMELLRRHAFPLKCQIN
GLNYQKIMKSIDDVLHLSLIFGVQVSEPGLLLVEFVFSIVWQLLDASLDDEGLLELTPEK
RSIWPTVTQDMEIDTADNFNETRSAHHDVLYKGNTIIAIEIIVEFLQNKVTSRILFLARR
NMPSHWEAFIQQLRVLAAKSVALRNSKHITPEKLLQLTSDTHNVLSRECKRISQQVLHAV
MGDGSLTSPSGQWHGTSPSALWLPIDMFLEDAMAGPQVAASGAIDRLAGLVKALQAVNGT
TWHDAFLGLWIAALRLVQRERDIIEGPVPRLDTCLCMLLSITTLVVANIVEEEESELIDE
TDGSPSNPTKEKQTTGRCRKGLISSLQMLGDYEALLTPPQAVCSVANQAAAKAIMFHSGR
TVGNGYYECMSINDMPMNCSGNLRHLIIEACISRNLLDTSAYLWPGYVNVRANIPLSVPS
QVPGWSSLMKGSPLTPTLINALVATPASSLPEIEKIYEIATKGSDDEKISAASILCGASL
VRGWNIQEQVVLFIISLLSPPVPADYSGSESHLIRYAPFFNVLLVGISPVDCIQIFSLHG
MVPLLAGALMPLCEVFGSTAPNGSWTLPTGEELTSHAVFSNAFTILLMLWKFDHPPVEHV
MRDATPVGSERSPDYLLLVRNSKLSAFGKSAKDHLKIRRMSKILNFCMEPIFMDSFPKLK
RWYRQHQKCIASTLSGLVQGTTVHQIVDALLNMMFRKIGRAAQSSTSTTSGSSSSSASGA
EDILARLKVPAWDILEGAPYVLDAALTACAHGRIAPRELATGLKDLADFLPATLGTIISY
FSAEVTRGIWKPVFMNGTDWPSPLANLSVVLQQIKKFIAATGVDVPSLETGGSSPAMLPL
PLAALVSLTITYKLDKSSERSLVLLGPAMSSLGGSCPWPCMPIISALWAQKVKRWNDFLV
FSSARTVFHHNSDAVVQLLRSCFTATLGLSPSIMCSNGGVGALLGHGFGSHFSGGMAPVS
PGIMYLRSHRTIRDIMFMTEEIVSLLMFSVKEIASRLSQEKMEKLKKTTFGLRYGQVSLG
TAMTRVKLAASLGASLVWLSGGLSLVQSLIKETLPSWFISAHTPELDRGEPGGVVSMLRG
YALAYFAVLCGTFAWGVDSVSPESRRRPKVLDSHLEFVASALDGKISLGCDYATWRAYVT
GFVSLMVGCTHKWVLDVNVDVLKRLSNGLRQWNEEELAIALLGLGGATATGTAAELIVEI
GA
NT seq
3969 nt
NT seq
+upstream
nt +downstream
nt
atggaggttggtacggtatgggaatcagttctggagcagactaaatctgctcaggacaag
aacagtgacccacttgtttgggcggttcaactcagttctaggcttaactcagctggggtt
tcattgccttcgatcgacctggctcatcttcttgtttctcacatctgctgggataatcac
ttgcccattacgtggaagttcctggagaaggccttgactgccaatttcgtccctcccatg
ctcgttcttgcccttctctctacgagggtcattccaaagcgtaagtttcatcctacagca
tatcggctttacatggaactccttaggagacatgcctttccacttaaatgtcaaatcaat
gggctaaattatcaaaagattatgaaatcaatagatgatgttctacatctttccctgata
tttggcgttcaagtgtctgaacctggtctgcttctagttgaatttgttttttcaattgta
tggcaactgcttgatgcttcactagatgatgaagggttactggaacttacaccagaaaag
agatctatatggcctactgtaactcaagacatggaaatagataccgctgacaactttaat
gagacgagaagtgcgcaccatgatgtgctgtataaaggaaatactataatagctattgag
ataattgtggaatttctgcaaaataaagtgacttcgaggattctcttcttggcacgaaga
aacatgccatcacattgggaagctttcattcagcaattaagagttcttgcagcaaagtca
gtggcattgagaaattcaaaacatattacaccagagaagcttctgcagctgacatctgat
acacataacgttctatctagagaatgtaaaagaatatctcaacaagtgttacatgctgtt
atgggcgatgggtccctaacatctccatctggtcagtggcacggaactagtccttctgca
ctttggcttcctattgatatgtttcttgaggatgctatggctgggccccaggtggctgca
agtggtgctattgatagacttgctggtttagtaaaggctttacaagcagtcaatggtaca
acttggcacgatgcatttctaggtctatggattgcagctttgaggcttgttcaaagggaa
agggacattattgagggtcctgtacctcgccttgatacctgcttgtgcatgttattgtct
atcaccacgcttgtggtggccaatattgttgaggaagaggaaagtgagttgattgatgaa
actgatggtagcccgtcgaatccaacaaaagagaagcaaaccacgggaagatgtcgtaag
ggtttaatatccagcttacagatgttgggcgattatgaggctttattgactccacctcaa
gcagtttgttcagtagccaaccaggctgctgccaaagcaatcatgtttcattctggtcgc
acagttggcaatggatactatgagtgcatgagcattaatgacatgcccatgaattgctct
ggaaacttgcggcatctgattattgaggcttgtatttccagaaatctattggacacatca
gcatatctctggccaggctatgtaaatgtacgtgcaaatataccccttagtgttcctagt
caagtgcctggttggtcgtcgttgatgaaaggatcccctctaactcctacgttgataaat
gcgttggttgctactccagcttctagcttaccagagatcgagaaaatatacgagattgca
accaaaggttcggatgatgagaagatatctgctgctagcattctttgtggggcatctcta
gtgcgtggttggaatatacaggaacaagttgttctcttcattataagtttgttgtcgcca
ccagttcctgctgactattctgggagtgagagccatttgatcagatatgccccatttttt
aatgttcttcttgttggaatatcacctgtagattgcatccagatcttctctttacatggc
atggtccccctactcgctggtgcattgatgcccctttgtgaggtttttgggtcaactgct
cccaatggttcgtggactcttccaacaggggaagaactgactagtcatgcggttttcagc
aatgcattcactattctactgatgttatggaagtttgatcatccacctgttgaacatgtg
atgagagatgcaacgccggtgggatctgaacgaagtcccgattatctgttgttggttaga
aactctaaattatcagcttttggcaaatcggcgaaggatcatttgaaaattagaagaatg
tcaaaaattttaaacttctgtatggaacccatttttatggattcctttcccaagttaaaa
cgctggtaccggcagcatcaaaaatgcattgcttcgaccctatcaggacttgtacaaggg
accactgttcatcagattgttgatgcactcctcaatatgatgtttcggaagataggcagg
gctgctcagtcttcaacttctacaacttctggaagtagtagttcttctgcatctggagct
gaggatatcttggcaagactaaaagtgccagcatgggatatcctggaaggagctccctat
gtgcttgatgcagctctgacagcctgtgcccatggaagaatcgcaccccgtgagctggca
acaggacttaaagatcttgctgatttccttccagcaaccctgggaaccatcattagctac
ttctctgctgaagtaacacgaggtatatggaagccggtttttatgaatggaacagattgg
cctagtcccttggcaaatttatccgtcgttctgcaacaaattaaaaaatttatagctgcc
acaggtgttgatgtcccaagccttgaaacagggggaagctctccagctatgcttcctttg
cccttggctgccctcgttagcctcacgataacctataaacttgataaatcctctgagcgc
tcccttgtattacttggcccagcaatgagttccctaggtgggagttgtccttggccatgt
atgcccatcatatctgcactatgggctcagaaggttaagcggtggaatgatttccttgta
ttctcttctgctcgtactgtcttccaccacaacagcgatgctgtagttcagcttcttagg
agttgcttcacggctactcttggattaagcccttcgatcatgtgcagcaatggtggagtg
ggtgcactcctcggtcatggatttggctctcatttctcagggggaatggctccggtttcc
ccagggattatgtacttacgatcacatcgaacaatcagagatatcatgtttatgacagaa
gaaatcgtttctcttttaatgttttctgtaaaagagattgccagtaggttatcccaggag
aaaatggagaagctgaaaaagacaacgttcggactgagatatggccaagtttctcttgga
acagcaatgacacgagtcaaactcgctgcttcacttggggcttcattggtttggctatct
ggtgggttaagcttagtccaatcattgattaaagaaacattaccttcttggttcatatca
gcccatacacctgagctggaccgtggggaacctggaggtgtagtttccatgctaaggggt
tatgcacttgcatactttgctgtgctttgtggtacattcgcatggggtgtggactcagtc
tcaccagaatcaagacggcgaccaaaagttctcgactcacacttggaatttgttgcaagt
gcattagatgggaaaatatcgctcggatgtgattacgccacttggcgtgcatacgtaact
ggttttgtgagcctgatggtaggatgcactcacaagtgggttttggatgtcaatgttgat
gttttgaaaaggctgagcaatggattgaggcagtggaatgaggaagaactggctatagct
ttgctcggacttggcggcgccactgctacgggcacagctgctgaattgattgtcgaaatc
ggagcttaa
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