Gossypium hirsutum (upland cotton): 107944078
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Entry
107944078 CDS
T04793
Name
(RefSeq) cullin-4
KO
K10609
cullin 4
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03420
Nucleotide excision repair
ghi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107944078
09124 Replication and repair
03420 Nucleotide excision repair
107944078
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107944078
03400 DNA repair and recombination proteins [BR:
ghi03400
]
107944078
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ghi04147
]
107944078
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Cullin
107944078
DNA repair and recombination proteins [BR:
ghi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
107944078
TCR (transcription coupled repair) factors
Cul4-CSA complex
107944078
Exosome [BR:
ghi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
107944078
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Motif
Other DBs
NCBI-GeneID:
107944078
NCBI-ProteinID:
XP_016733384
UniProt:
A0A1U8N6F4
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Position
A10:3999406..4005940
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AA seq
828 aa
AA seq
DB search
MSLPPTKRSLSSNAAVASSLSSSSSSSSSSSSSSHFQQSMKKAKSQAVACSLDPNKNGLH
NRHNNQGDIDVVFDPSSPMALDDDSKSDDGRAPAAANLSRKKATPPQPAKKLVIKFVKAK
PTVPMNFEEETWAKLKSAINAIFLKQPDSCDLEKLYQAVNDLCLHRMGGSLYQRIEKECE
ARISAALKSLVGQSPDLVVFLSLVEKCWQDLCDQMLMIRGIALYLDRTYVKQTPNVRSLW
DMGLQLFCKHLSLAPEVEHKTVTGLLRMIESERLGEAVDRTLLNHLLKMFTALGIYSESF
EKPFLERTSEFYAAEGMKYMQQSDVPDYLKHVEMRLNEENERCLLYLDALTRKPLIATAE
RQLLERHISAILDKGFMMLMDGHRIEDLQRMYSLFSRVNALESLRQALSSYIRRTGQSIV
MDEEKDKDMVSSLLEFKASLDSILEESFSKNEAFCNTIKDSFEHLINLRQNRPAELIAKF
LDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAE
KSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQARTKLRSGIEMSVHVLTTG
YWPTYPPMDVRIPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKADFPKGKKELAV
SLFQTVVLMLFNDAQKLSFQDIKDSTGIEDKELRRTLQSLACGKVRVLQKLPKGRDVEDD
DSFIFNEGFTAPLYRIKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKVLS
HTLLITELFEQLKFPIKPADLKKRIESLIDREYLERDKNNPQIYNYLA
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgtctctccccccaaccaaacgctctcttagctccaacgccgctgttgcttcttctttg
tcttcttcttcttcttcttcttcttcttcttcttcttcttctcactttcaacagtcaatg
aagaaagccaagtcccaagccgtggcttgttctcttgaccccaataagaacggccttcac
aaccgccacaacaaccaaggcgatatcgacgtcgtcttcgacccttcttcacctatggcc
ctcgacgacgattccaagtccgacgatggtcgcgctcccgccgccgccaatttgtctcgc
aaaaaggctaccccacctcaacccgccaagaagctcgtcatcaaattcgttaaagcaaaa
ccgacagtgcctatgaattttgaggaggaaacgtgggcaaagctgaagtcagccattaat
gctatttttctaaagcaaccagattcatgtgacttggagaagctttatcaggctgtcaat
gatctttgcctgcataggatgggaggaagtctttatcaacgaattgaaaaagagtgtgaa
gcacgtatatcggcagcattaaaatctttggttgggcaaagtccggacctcgtggttttc
ttatcgcttgttgagaaatgttggcaagatctttgtgatcaaatgttgatgattcgtggt
atagccttgtacctggacagaacatatgttaaacaaaccccaaatgtacgttcattgtgg
gacatgggcttgcaacttttctgtaaacatctttctctggctccagaagttgagcacaaa
actgtcaccggtcttttaagaatgattgagagtgagaggttaggtgaagcagttgacaga
acactacttaaccatcttttgaagatgtttactgctttaggtatttactcagaaagcttt
gagaagccattcctggagcgtacatccgagttttatgcagctgaaggaatgaaatacatg
cagcaatctgatgttccagattacttgaagcatgtagagatgaggttaaatgaagaaaat
gaaagatgcttactctacctggatgctcttacgagaaagccgcttatagcaacagcagaa
aggcaactgctggaacgtcatatatctgccattcttgataagggatttatgatgctgatg
gatggacaccgtatcgaggaccttcagaggatgtactcactgttttcaagggtcaatgct
cttgaatcactcaggcaggccctaagctcatatattcggagaactgggcagagcattgtc
atggatgaagagaaagacaaggacatggtgtcttccttgttagaattcaaggcttcactt
gactccatattggaagaaagcttttccaagaatgaggcattttgcaacaccattaaggat
tcttttgagcatctaattaatcttcgtcagaatcgacctgctgagcttattgctaagttt
ctggatgaaaagcttcgtgctggtaataagggtacttctgaagaggaattagagggtaca
cttgataaagttttggttttattcaggttcatccagggcaaggatgtttttgaagcattc
tataagaaggatcttgctaaaaggctgcttttagggaagagtgcttctattgacgcagag
aaatccatgatttctaagctgaagacagagtgtggcagccagtttacaaacaaacttgaa
ggaatgttcaaggatattgaactatcaaaggagataaatgaatcattcaagcagtcatcc
caagccaggacaaaacttcgatcaggaattgagatgagtgtccatgtcttaacaactggg
tactggccaacatatccacctatggatgttaggattccacatgaattgaatgtctatcag
gacatcttcaaggagttctacttgagtaagtacagtgggagacgcctaatgtggcaaaat
tcattgggtcattgtgtgttgaaagcagattttcccaaaggtaaaaaggagctggcagtt
tccctgttccagactgtagttctgatgttgttcaacgatgcccaaaagcttagctttcaa
gacattaaagactccactggcatagaggacaaggaattgagaaggaccttgcagtccctt
gcgtgtgggaaagtgagagtcctgcaaaagttgccaaaagggagagatgtcgaagatgat
gattctttcattttcaacgaaggatttactgctcctctctatcgtataaaggtaaatgca
atccagatgaaagagacagtggaggagaacacaagcaccactgaaagagtatttcaagac
cgtcaatatcaggttgatgctgctattgttcggataatgaagacgaggaaagtgttgagt
cacactcttttgataactgaactcttcgaacagctaaagtttcccataaaaccggctgat
ttgaagaaaagaatcgagtctctcattgacagggagtacctggagcgggacaagaacaac
ccacaaatatacaattatttggcataa
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