Gossypium hirsutum (upland cotton): 107946351
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Entry
107946351 CDS
T04793
Name
(RefSeq) DNA-3-methyladenine glycosylase-like
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
107946351
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ghi03400
]
107946351
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
107946351
DNA repair and recombination proteins [BR:
ghi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
107946351
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
Motif
Other DBs
NCBI-GeneID:
107946351
NCBI-ProteinID:
XP_016736118
UniProt:
A0A1U8NDR9
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All DBs
Position
D12:49953466..49955345
Genome browser
AA seq
319 aa
AA seq
DB search
MLFSNMSKTNMVRRHVLEKKRSCSKEKESGCLSKHLKKIYPIGLQRTSSSLSLSSLSLSL
SQNSNDSSLTDHSSTPLEQKISLALSLIAPHRERREFPMVVKTHVQHHHQQQQQDPPGNG
EVRRCHWVTKNSDKVYISFHDEQWGVPVYDDNKLFELLALSGMLMDYNWTEILKRKDLYR
ESFLGFDPEIVAKMGDKEIHEISSNKAMMLAESRVRCIVDNAKCILKIVRQYGSFSSFMW
GYVNYKPTINKYKYPRNVPLRTPKAEAISKDLVKHGFRFVGPVIVYSFMQAAGLTIDHLV
DCFRYSECVSLAERPWRHF
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgttgttctcaaacatgtctaaaacaaatatggtaaggagacatgtattagagaagaag
agatcatgttccaaagagaaagaaagtggttgtttatctaaacatctgaagaaaatctac
ccgattgggcttcaaagaacctcttcatctttatcgttatcatccttgtccttgtctttg
tcacaaaactccaatgattcatctcttacagaccattccagcacgcccttggaacaaaag
atttcattggcacttagcttgattgctcctcaccgtgagcgaagagagttccccatggtt
gtcaaaactcatgtccagcatcatcaccagcagcagcagcaggatcctcctggcaatggt
gaagtgaggaggtgccattgggttacaaagaacagtgataaggtttacatatcatttcac
gatgaacaatggggtgttcccgtttatgatgacaacaaattgttcgagctgcttgcactg
tctggtatgctgatggattataattggacagagattttgaaaaggaaggatctatacaga
gaatccttcttgggttttgatcctgaaattgttgctaaaatgggggataaagaaatccat
gagatatcatcaaacaaagcaatgatgttggcagagagtagagtaaggtgcatagtagac
aacgccaagtgcatactcaagatagtgaggcaatatgggtccttcagcagcttcatgtgg
ggatatgtgaattataaaccaaccatcaacaaatacaaataccccagaaatgttccactt
agaactccaaaagcggaagccattagcaaggacttagtgaagcatggattcaggtttgtt
gggccagtgattgtgtattcattcatgcaagcagcagggttgaccatcgatcatctggtt
gattgtttcagatacagtgaatgtgtaagcctagctgaaagaccatggaggcacttttaa
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