Gossypium hirsutum (upland cotton): 107946434
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Entry
107946434 CDS
T04793
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107946434
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ghi01009
]
107946434
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107946434
03036 Chromosome and associated proteins [BR:
ghi03036
]
107946434
Protein phosphatases and associated proteins [BR:
ghi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
107946434
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
107946434
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
107946434
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
Vac14_Fab1_bd
Htt_N-HEAT_1
PDS5
HEAT_EZ
SCD
Adaptin_N
RTP1_C1
CLASP_N
Cnd1
DUF3102
Motif
Other DBs
NCBI-GeneID:
107946434
NCBI-ProteinID:
XP_016736252
UniProt:
A0A1U8NB45
LinkDB
All DBs
Position
D12:51331066..51337836
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AA seq
587 aa
AA seq
DB search
MSTVEEPLYPIALLIDKLKNDDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDD
DEVLLAMAEELGVFIPYVGGVEHARVLLAPLETLCTVEETCVRDKAVKSLCRIGSQMKEN
DLVDWFVPLVKRLAAGEWFTARVSACGLFHIAYPSAPEMLKTELRSIYSQLCQDDMPMVR
TSAASNLGKFAATVENAHLKAEIMQIFNNLTQDDQDSVRLLAVEGFAALGKLLEPQDCVA
HIIPVIVNFSQDKSWRVRYMVANQLYELCEAVGPQPTRTDLVPAYVRLLRDNEAEVRIAA
AGKVTKFSQILSPELANHHILPWVKELSSDSSQHVRSALASVIMGMAPVLGKDATIEQLL
PIYLSLLKDEFPDVRLNIISKLDQVNQVVGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGTLCMQWLQDKVYSIRDAAANNLMRLAEEFGRDWAMEHIIPQV
LQMANSPHYLYRMTILRSISILAPVMGSEITCSKLLPVVVNASKDRVANIKFNVAKVLQS
LVPIVDKSVAEKTIYPCLVELSEDSDVDVRYFANQGLQSINHATMSS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgtctacggtggaagaaccgttgtatccaatagctctcctgatagataagctaaaaaat
gatgacatccagcttcgtttaaactcaatccgtaggctttcaaccattgctcgtgctctt
ggggaagagcgaaccaggaaggaattaattccatttctgagtgaaaacaatgacgatgat
gatgaggtgcttcttgcaatggctgaggagctgggagtgtttattccctatgttgggggt
gttgaacatgcccgtgttttgctcgcccctttggaaaccctttgcactgttgaggaaacc
tgtgtaagggacaaagctgtcaagtcattatgcagaattggatctcagatgaaggagaat
gacttggttgactggtttgttcctctagttaagaggctggctgctggtgagtggtttaca
gctcgagtttcagcctgtgggctgtttcatattgcttatccaagtgcccctgagatgttg
aaaacagaattacggtcaatatacagccaattgtgtcaagatgacatgccaatggtaaga
acgtctgccgcatcaaatctggggaaatttgctgcaacagttgaaaatgctcatttgaag
gctgagatcatgcagatatttaataatcttacacaagatgatcaagattcagttcggtta
ttggctgttgagggatttgccgctcttggaaagttgttagaaccccaggattgtgttgca
cacattatccctgtaattgtcaatttctcccaggataaatcttggcgtgtgcgttatatg
gttgcaaatcagttatatgaactttgtgaagctgtaggaccacagcctactaggacggac
ttggtgcctgcatatgtgcgcttgcttcgcgataatgaagctgaagttcgcattgcagct
gcaggaaaagtaactaaattttctcaaattttgagtccagaacttgcaaaccatcacatt
cttccttgggttaaggagctgtcatcggattcttcgcaacatgtccgctccgctttagct
tcagttattatgggaatggctcctgtccttggaaaggatgcaactatcgagcagcttctt
ccaatatatctctctcttttgaaggatgaattccctgacgtgcgtcttaacataatcagc
aagcttgatcaagtgaatcaggttgttggaattgatcttttgtcccaatccttattacca
gccattgttgagcttgctgaggatagacattggagggttcggcttgctataattgagtat
ataccattattggctagtcagttaggtgttggattttttgatgataaacttggcaccctt
tgcatgcaatggttgcaggataaggtttactctattcgagatgcagccgctaataatttg
atgcgtcttgctgaagaatttggccgagattgggcaatggagcacattattccgcaggta
ctacagatggcaaactctccacactatctgtaccggatgaccattcttcgttccatttct
atacttgctcctgttatgggatcagaaataacatgttctaaactgctgccagttgttgta
aatgcatcaaaagacagagtcgccaatattaagtttaatgtggcaaaagttttgcagtct
ctcgttcctatcgttgataagtctgtggcggagaagacaatctatccatgcttggttgag
ctgagcgaggactcagatgtggatgttcgttattttgctaaccaaggacttcagtcgatc
aatcatgctacgatgtccagttag
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