Gossypium hirsutum (upland cotton): 107948285
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Entry
107948285 CDS
T04793
Name
(RefSeq) trafficking protein particle complex subunit 8-like
KO
K20305
trafficking protein particle complex subunit 8
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107948285
Membrane trafficking [BR:
ghi04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
107948285
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TRAPPC-Trs85
TRAPPC9-Trs120
SNAP
Motif
Other DBs
NCBI-GeneID:
107948285
NCBI-ProteinID:
XP_040967117
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Position
A04:17749132..17761117
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AA seq
1093 aa
AA seq
DB search
MVDPANTPLGKMLLEEITPVVMVLCTPLVEESCLKNGLSFVQMLSPFCDFTNIDVPVRTA
SDQPYRLHKFKLRLFYASDIWQPNLEVAKERLKQVITKAGEDDFPEISSDLPQVNDLLSR
HESEILPTWFQFFNKELVRTLSFSDHEAFDHPVACLLVVSSCDEEPINRFLDLFNTSKLP
SLLNDGAMDPKILKHYLLVHDNQDGASEKYATPSYLFMKLGSPVQQNATRCGFWWIEMLK
TRNQIKEAATVYFRICGEDLLHSAVMLEQASFCYLLSKPPMLHKYGFHLVLSGDHYKKCD
QIKHAIRTYRNAVSVYRGTTWNLIKDSVHFHIGQWYASLGMYDVAVTHMLEILASSHQSK
TSQELFLRDFLHIVQKTGKMFEVLKLQLPVINISSLKVIFEDHRTYASPAAASIKEGVWC
SLEEDMIPSLSAKSNWLDVQSKRIPRKYKESNICVAGEAIIVDIEFKNPLQIPISILSVS
LICELSANPEELNSEANTSNVEPQNDEYKTSTSTGDINSSLVLSEVDFSLEGGETILVQL
TVTPRVEGILTIVGVKWKLSSSVVGLHNFESNSVNKRIAKGRKAKHSPSADLKFVVIKSL
PRLQGFIPSLPEKTYAGELRYLVLELNNQSKFPVKNLKMKISNPRFLNAGNQSYLNVEFP
ACLEKKLNVEQSGGHGNAKKMLQNVFHFPEDISVQEETSLSWPLWFHAAVPGHVSLYITV
YYEMENVSSIMKFRTLRMHYNLQVLPSLDVSFELSPCPSRLEEFLLRMDVVNKTSSECFQ
IHQLSSVGQQWDFSLLQPVDSILPSQSLFAGQALSCFFMLKYHRKSSTSEDSNPLFLQSD
VRFGPPGNSEALFDVCSSPLADFHGYERLYQGMSCQGNVDFVFITQLRRGNIDSGAPHRP
LLFSHHVCHCSLSSFSSISWFVDGPQTIQHNFSASPCGVNLKMTINNSSDAASFVHIKTF
DPRSSNSQSIDATASQSGLPLENQAGWFSIPAVNDTKVITTDALAKRITNSVSLESAPQF
IWTGSSSTKLKLQPRATAEIPLEICVFAPGIYDLSNYALNWNLAPIEESQGEANKSSGEC
QGYPYYLTVLQST
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atggtggatccggcgaatactccgcttggaaagatgctgttggaggagatcactccggtg
gttatggtgctttgcactccactcgtagaagaatcttgccttaagaacggcctctccttt
gtccaaatgctctcccctttctgcgacttcaccaacatcgatgtgcctgttcggacggcg
agtgatcaaccctacaggttgcacaagttcaaattgaggttgttttacgcctcggatatt
tggcaacccaatctcgaggtagcaaaggagagactaaagcaagttattactaaggcggga
gaggacgatttccctgaaatatcttcagatctacctcaagtgaatgatcttctctcaagg
catgagtctgaaattttaccgacatggtttcagtttttcaataaagagcttgtacgtacc
ttgtctttttctgatcatgaagcttttgatcatcctgtggcatgccttttggttgtttct
tcatgcgatgaggaacccataaatagatttttagacctctttaacaccagcaaattgccc
tcccttctcaatgatggtgcaatggacccaaagattttgaagcattacttacttgtgcat
gataatcaagatggtgcttcagagaagtatgccacaccttcatatttgtttatgaagctt
gggtctcctgttcaacaaaatgctacgagatgtggtttttggtggatagagatgctgaag
acaagaaatcagattaaagaagctgccactgtttatttccgcatttgtggtgaggatctt
ttacattcggctgtgatgctcgagcaagcttctttttgctacttgttgtcaaaaccacca
atgctgcataaatatgggtttcatcttgttctctctggtgatcactataaaaaatgtgat
cagattaaacatgcgatacgcacatataggaatgctgtttctgtttacagaggaaccaca
tggaaccttattaaagatagtgttcatttccacattggacagtggtatgcttctcttggc
atgtatgatgttgcagtcactcatatgctggagatcttggccagcagtcatcaatcaaag
acatcacaggagctatttctgagagattttcttcatattgttcagaaaactggaaaaatg
tttgaggtgttgaaacttcagttacctgttatcaacatttcctcacttaaggtcattttt
gaagatcatcgaacttatgcatctcctgcggctgcaagcatcaaagaaggtgtatggtgt
tcactggaggaggatatgatcccatcattgtctgccaagtccaactggctggatgtgcaa
tcaaagcgtattccgagaaaatataaagaatccaatatttgtgtggcaggagaagcaata
atagtggatattgaatttaaaaaccctctgcaaatccctatttccatcttaagtgtttca
ttgatatgcgagctttctgcaaatcctgaagaattgaactctgaggcaaatacttcaaac
gtcgagccccagaatgatgaatacaaaacatcaacttccactggggatattaattcatct
ttggttttatcggaggttgacttttcactggaagggggtgaaacaatcttggtgcaacta
accgttacaccaagagtagaaggcattctgacaattgttggtgttaaatggaaattgtca
agttcagtagtaggcttgcataattttgagtctaactctgtgaacaaaagaattgccaag
ggaaggaaagccaagcattcgcccagcgctgacttgaagtttgtagtgattaagagtcta
cccaggcttcagggttttattccttctttaccagaaaaaacatatgcgggagagttgcga
tatcttgtgttggagttaaataaccaatcaaaatttcctgtcaagaatctaaagatgaag
atcagcaacccgagatttctaaatgctgggaatcagagttatttaaatgtagaatttcct
gcttgcttagaaaagaagttgaatgtcgagcaaagcggtgggcatggtaatgctaagaaa
atgttgcagaatgtgttccattttcctgaggacatatcagtgcaggaggaaacatcatta
tcttggcctctttggtttcatgctgctgttcctggccatgtttctttgtacattactgta
tattatgaaatggaaaatgtatcaagcattatgaaattccgcactctacgtatgcattat
aatttgcaggttttaccatcgttggatgtatcatttgaacttagtccttgtccatcaaga
ttggaagagttcctcttgcgtatggatgttgtcaacaagaccagttctgaatgtttccag
attcatcagttgtcttctgttgggcagcagtgggatttctcattgctccaacctgttgat
agcattttaccgtctcaatccttatttgctggtcaagcattgtcatgcttcttcatgctt
aagtatcacaggaagtcatcaacttctgaagatagtaatcctcttttcctccagagtgat
gtaagattcggacctccgggaaacagtgaagccctcttcgatgtatgttcttcacctttg
gctgatttccacggttatgagagattgtaccagggaatgtcatgtcaggggaatgttgat
ttcgttttcatcactcaactgcggaggggtaatattgattctggtgctcctcatagacca
cttctcttttcccatcatgtttgtcattgcagtctttctagcttcagttcaatatcttgg
tttgtggatgggcctcagaccatacaacataacttctcagcttctccatgtggagtaaat
ttgaagatgactataaacaattcatccgatgctgcttcatttgtccatatcaagaccttt
gatccccgcagtagtaacagccaatcaatcgatgctactgcatctcaatcaggtctccct
ctggaaaatcaagcagggtggttcagcattccagcagtgaatgacacgaaagtcatcaca
accgatgctcttgcaaaacgtattacgaactcagtttccctggaaagtgccccccagttc
atttggacaggttcaagctctactaaactcaaacttcaacctagggcgacagctgaaatt
cctcttgagatctgtgttttcgctcctggaatatacgatttatcaaactatgctttgaat
tggaatctagcacccattgaagaaagtcaaggagaagcaaacaagtcttcgggagagtgc
caaggatatccctattatcttacggtgctgcaatctacttaa
DBGET
integrated database retrieval system
