Gossypium hirsutum (upland cotton): 107950505
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Entry
107950505 CDS
T04793
Name
(RefSeq) glycogen synthase isoform X1
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00500
Starch and sucrose metabolism
ghi01100
Metabolic pathways
ghi01110
Biosynthesis of secondary metabolites
Module
ghi_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
107950505
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ghi01003
]
107950505
Enzymes [BR:
ghi01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
107950505
Glycosyltransferases [BR:
ghi01003
]
Polysaccharide
Storage polysaccharide
107950505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_5
Glyco_transf_4
Glyco_trans_4_4
COG6_N
Motif
Other DBs
NCBI-GeneID:
107950505
NCBI-ProteinID:
XP_016740845
UniProt:
A0A1U8NPT4
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All DBs
Position
D03:complement(3691202..3700635)
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AA seq
690 aa
AA seq
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MSMATLINPAIPSSPSRRFSIPLTSPNSHFVKAPSLLRCVRKNGEINGLSRTPPPMDNGG
EDDAETSLEESSNVELESKNNEIWRLFKEAQQNILYLNKQRVKAVDELNKAKREKQLLLN
KIEQLEKENKRVSGKDNLVVCWELLLRIDSMVLGGMVSTEEASKLRRMVIDSKVSLVDVF
SGLLQQRDAELLAELRLFSEGSKRKGYHVIHICTEMEPLISVGPLAPYITGLSRALQRKG
HLVEVILPKYASLDLDEVQGLREIEADSSSFFNGQLHGNRIWTGVVRGIGVTFIQPLYFS
SFFNRDGIYDHPDDFERFTYFSRASLDYIAKSGKQPDVLHLHNWETAIVGPLFWDIFAKQ
GLGNTRILLTCQGFDSQCLDEPDKLALCGLDPGRLHRADRFQDTAKTHLVNILKGGVVYS
NKVIVMSSMHSKGRIIHSMSHGLEPTLSMHKEKLLVAPYGFDNSTWDPSTDKFLPVNYST
ENMRGKYACKVALQQQAGISTHASSILVGCIISEESGFDLEKLKAVVRNAIREGAQFVLL
GNGSVSTTYRALRSFQEAVEDSNVKFFYNYDEALSHLVFAGSDIILCHSFHEPLLQVQLK
ALRYGAAPVSEASGDNHLRYSSDHDHEITKFSQFMRSTFGVMSLSQALDEMKNNPSTWKT
KILNAMKKDFSWDSECYETHVSAYTAVKSL
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatggcaactctgataaaccccgcgatcccttcttcaccttctcgtcgcttctcc
attcccttaactagccctaattctcacttcgttaaagctccttcgctccttcgttgcgtt
aggaagaatggtgaaataaatggcttatctagaactccaccgccgatggataatggaggt
gaagatgatgcggaaacgtcactggaagagtcatccaatgttgagctggaatcaaagaat
aatgagatatggcgattattcaaggaagctcagcagaatattttgtatttgaataaacaa
cgggtgaaggctgttgatgagctgaacaaagcaaagagggagaagcaattattgcttaat
aagatagagcaattggagaaagaaaacaaaagagttagtgggaaagataatctagttgtg
tgctgggaactgttacttcggatagactcaatggtccttggtggaatggttagcactgaa
gaggcatctaaattgagaaggatggtcatagatagtaaagttagtctagtggatgtattc
tcaggtttgctgcagcaaagagatgctgaacttctcgcagaactccgcctcttctctgaa
ggaagcaaaaggaaaggttatcacgtcattcacatatgtactgaaatggaaccgttgatc
tcagtagggcccttagcaccatacataactggcttatctcgtgcgctgcaaagaaagggt
catttggtggaagttattttgccaaagtatgctagtcttgacctagatgaggttcagggg
ttgcgagaaattgaggcagactcttcttctttctttaatggacagctgcatggaaacaga
atctggactggggttgtccgtggcattggagttacttttattcaacctttatatttttca
tcttttttcaaccgagatgggatatatgaccatccagacgactttgaacgatttacctat
ttctctcgtgcttcattggattatatagccaaatccggaaagcaacctgatgtgttacac
ttacataactgggagactgctattgttggacctctattctgggatatttttgctaaacag
gggctaggaaatactagaatattattaacttgccaaggctttgactcacagtgtctcgat
gaacctgataagctagcactttgtggacttgatcctggtagacttcatcgtgctgaccgt
tttcaagatacagctaagacacatcttgtgaacattttgaagggtggggtagtgtattct
aacaaggttatagttatgtcatccatgcattctaaaggaaggatcattcacagtatgagt
catggattggaacctaccttaagcatgcacaaggaaaaattgcttgttgctccttatggc
tttgataattctacctgggatccatccacagataaatttcttccagtaaattatagtaca
gagaacatgagaggaaaatatgcgtgcaaagttgcattacaacagcaggctggcatatca
acacatgcttcttctattctggttggatgcatcatctcagaagaatcgggttttgatttg
gagaagctgaaggcagttgtgcggaatgctatcagagagggtgcacagtttgtattattg
gggaatggttcagtgtcgactacatatagagcactcagatctttccaggaagcagttgag
gattcaaacgtgaaattcttttacaactatgacgaagcgctatcacatttggtttttgca
ggatctgacattatattgtgccattcctttcacgagcctctacttcaagttcaactcaag
gctttaagatatggagctgccccggtttcagaagcctcaggtgataaccacctcagatac
tcgtcagatcatgaccatgagatcactaagttctcacagttcatgagatctaccttcgga
gttatgtctcttagccaagcccttgatgaaatgaaaaacaacccatcgacatggaaaaca
aagatattgaacgccatgaagaaggacttctcgtgggattcagaatgctatgaaactcat
gtctcggcatacactgctgttaaaagtctgtga
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