Gossypium hirsutum (upland cotton): 107952949
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Entry
107952949 CDS
T04793
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
107952949
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ghi04040
]
107952949
Ion channels [BR:
ghi04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
107952949
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
IQ
Motif
Other DBs
NCBI-GeneID:
107952949
NCBI-ProteinID:
XP_040973875
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All DBs
Position
A07:complement(30523213..30527000)
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AA seq
718 aa
AA seq
DB search
MNLRRQRFVRFQDWNLDDGLFQMKVGQSLNAFMERLQGVFEKGVEKIRSLKKSISFRSLG
SNPATEKAKALGSKKRILNPQGQFLQTWNKMFLLSCAIALAVDPLFFYIPVVDGRRKCLN
LDDRLEITASVLRTFIDAFYILHMIFQFCTAFIAPSSRVFGRGELIEDLWPIAKRYLSKY
FIIDVLAILPLPQVVILIITPTIKGSVSLVTKDLLEFIIFVQYVPRIIRIFPLYKEVTRT
SGILAETAWAGAALNLFLYMLASHVVGAFWYLFSIEREDSCWRNAIGKGEESALYCDKHT
TTINTTLVNLLNSSCPFINPDDIKDSRAFNFGIFIDALDSRVVETWDFPKKFFYCFWWGL
RNLSSLGQNLKTSTFVWEILFAIVISIAGLVLFSLLIGNMQKYLQSTGVRVEQMRVKRQD
AEQWMSHRMLPENLRERIRKYEQYKWQETRGVEEETLVSNLPKDLKRDIKRHVCLDLLKR
VPMFEKMDERLLDAMCDHLKPALYTDKSYIVREGDPVEEMLFIIRGNLTSTTTNGGRTGF
FNAVHLKAGDFCGDHLLTWALDLRSSSNLPISTRTVQALTEVEAFALMADDLKFVASQFR
RLHSKQFQHTFKFYSVQWQTWAASFIQAAWRRYSKRKLMKSLREAEDKLQNALAKESETS
PSLGASPSLGATLYASKFPANALQTLRKNGSQSTRLPQRLPPLLPQKPAEPDFTAEDS
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgaatctccggcgacaaagatttgtaaggttccaagattggaatttagatgatggattg
tttcaaatgaaagttggacaatcattgaatgcatttatggagcgtctccagggagtgttt
gagaagggtgttgaaaagattagaagcttgaagaaatcaataagtttccgatctttgggc
agtaatccggcaactgagaaggcaaaggcattgggttccaagaagagaattcttaatcca
cagggacagtttcttcagacatggaacaaaatgttccttttatcatgtgccattgctctt
gctgtggatcccttgttcttttacatccctgtggtcgatggccgtcgcaaatgccttaat
ttggatgacagattggaaattacagctagcgtgcttcgaacattcatagatgccttttat
atacttcacatgatctttcagttctgcactgcgtttatcgccccgtcgtcccgggtattt
ggtaggggtgagttgattgaggatctttggccaatagcgaagagatacttgtccaagtat
ttcatcattgatgttctggcaattcttccactcccacaggtggtaatcttaattataact
ccaacaatcaaaggctcggtttcattggtcacaaaggacttgttggaattcattattttc
gtccagtatgttccgaggattattcgaatctttcctctttacaaagaagttacaagaact
tctggcatacttgcagaaacagcgtgggctggagctgctttgaatctcttcctctatatg
ctagccagtcatgtagtaggagccttttggtacttgttctcaatagaacgagaagacagc
tgctggcgcaatgccataggcaaaggtgaagaaagtgcattgtactgtgataaacacact
acgaccataaacaccacattagtgaacttgctgaatagttcatgcccatttataaatcct
gatgacataaaggattccagggccttcaacttcggtatattcatcgatgcacttgactca
cgggtggtggaaacttgggattttccaaaaaaattcttctactgcttttggtggggtttg
cgtaatttaagttctctgggtcaaaatctcaaaaccagcacttttgtgtgggaaatactc
tttgctatcgtgatctccattgctggactggttctgttttcactgcttattgggaatatg
cagaaatatctgcagtcgaccggagtcagagtcgagcaaatgagagtgaaaaggcaagat
gcagaacaatggatgtcccatcgaatgctacctgagaacctgagggaacgtattaggaag
tatgagcagtataaatggcaagaaaccagaggggttgaagaagagacgttggtttccaac
cttcctaaagatctcaagagggatataaagaggcatgtttgcttggatcttctcaagaga
gtgccaatgtttgaaaaaatggatgagagactgttagatgcaatgtgtgatcatctcaag
ccggcgctttacaccgacaagagctacatcgtccgagaaggggatccagtagaagagatg
ctgtttatcatccgaggaaatctaacaagtacgaccaccaacggtggaagaaccggcttc
ttcaatgcagttcatctcaaggctggtgatttttgtggagatcatcttcttacatgggcc
ttggatctccggtcctcatccaacctacctatctcaacaagaaccgtgcaggccttaact
gaagttgaagcctttgctttaatggctgatgacttgaagttcgttgcctcccagttccgt
cgtcttcacagcaagcagttccagcacactttcaagttctactctgtgcaatggcagact
tgggcagcatcttttatacaagcggcatggcgccggtacagcaagaggaagcttatgaaa
tcccttcgtgaagcagaggataagctgcagaatgctttggcaaaagagtccgaaacctcg
ccaagtctcggagcctcgccaagtctcggagccactctttatgcatcaaagtttcctgcc
aatgcattgcaaaccttgcggaaaaatggttcgcaaagcaccaggctgcctcaaagatta
ccaccacttcttcctcaaaaaccagccgagcctgattttacagctgaagacagctga
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