Gossypium hirsutum (upland cotton): 107955026
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Entry
107955026 CDS
T04793
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107955026
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107955026
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
107955026
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
107955026
NCBI-ProteinID:
XP_016746217
UniProt:
A0A1U8P4S5
LinkDB
All DBs
Position
D07:51838387..51842964
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AA seq
476 aa
AA seq
DB search
MSENGKLFIGGISWDTNEERLKEYFSSFGEVVEAVIMKDRTTGRARGFGFIVFSDPAVAE
KVIKEKHNIDGRMVEAKKAVPRDDQNIMSRSTSSIHSSPGPGRTRKIFVGGLASTVTESD
FKKYFDQFGKITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKNFHELNGKMVEVKRA
VPKELSPGPTRSPLGVYNYGLNRSNSFLNGYTQGYTPSNLGGYGLRMDGRFSPVAAGRTG
FPPFGSGYGMGMNFEPGLNPGFGNSTNFNNYGRGLSPYYIGNTNRFGSPIGYDGSNGGGG
NTSFFSSVTRNLWGNGGLNYNANAASSSAYAGSGSGSIGTSAFGNSGINWSSSQISSQGG
RNNVSGNNVNFSYGSGDNSFGLGTAGHERNTGTNVVLTSSYAASNGSYDGAFADFYGGAS
FYRDTTWPSSTSEHDGSGSFGYGLGSATSDVPGKSSPGYVGSYSVNKGQSNRGIAT
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagaatggtaagctatttattggtggaatatcttgggacaccaatgaagagcgt
ctcaaggagtatttcagtagttttggtgaagttgtagaagcagtgatcatgaaggatcga
accacagggcgtgctcgaggtttcggtttcattgttttctctgacccagctgttgctgag
aaagtcatcaaggagaaacacaacattgatggcaggatggttgaggcaaaaaaggctgtt
cctagggatgaccagaacataatgagtagaagcactagtagcatccacagttcacctggt
cctggacgcacaagaaagatttttgttggaggtttagcatctacagtcacagagagtgac
tttaagaagtattttgatcagtttgggaaaatcacagatgttgtagtgatgtatgatcac
aacactcaaaggcctaggggttttggattcatcacttacgattcagaagaggcagtcgac
aaagtgttgctaaaaaatttccatgaactgaatggtaaaatggtcgaggttaaacgagca
gttcccaaagagttgtcgcctggccctactcgtagcccccttggtgtatataactatggt
ctgaataggagcaacagctttcttaatggctacactcagggatatacccctagcaacctt
ggaggatatggacttaggatggatggtagattcagtccagttgcagcaggtcgaactggg
tttcctccttttggttctggttatggaatgggaatgaactttgagccaggattgaaccca
ggttttggaaacagtacaaattttaataactatggacggggattgagcccttactatatt
ggaaatacaaataggtttggtagtccgattgggtatgatggaagtaatggaggtggaggt
aatacttcctttttcagctcggtgacccggaatctttggggaaatggagggcttaattat
aatgcaaatgctgctagttccagtgcctatgcaggatctggaagtgggagtataggaaca
agtgcttttggaaatagtggaattaactggagttcttctcagatttccagtcaaggtgga
aggaataatgtttctggcaataatgttaatttcagttatggaagtggtgataacagcttt
gggttggggacagcagggcatgagagaaacactgggaccaatgtagtgctgacatcatca
tatgcagcatcaaatggcagttatgatggagcctttgcagacttttatggtggtgcttca
ttttacagggataccacttggccatcatcaacatctgagcatgatggttctggttccttt
ggctatggacttggtagtgccacttctgatgttcctggtaaaagttctcctggttatgtc
ggcagttatagtgttaataagggacaatcaaatagaggaattgctacctag
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