Gossypium hirsutum (upland cotton): 107955280
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Entry
107955280 CDS
T04793
Name
(RefSeq) RAB11-binding protein RELCH-like isoform X1
KO
K26154
RAB11-binding protein RELCH
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107955280
Membrane trafficking [BR:
ghi04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
107955280
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Gene cluster
GFIT
Motif
Pfam:
HEAT
MOR2-PAG1_C
ATG14
Bacillus_HBL
Motif
Other DBs
NCBI-GeneID:
107955280
NCBI-ProteinID:
XP_040972849
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Position
A07:78711903..78721316
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AA seq
1185 aa
AA seq
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MMDVERSSLCNCVVNFLLEENYLLTAFELLHELLDDGRDAQAIRLKEFFSDPSHFPPDQI
SRYNSLRVLDPQSLLEEKEAIEEKLALCEYELRLAQEDIVKLKTELQRKEDLTQDKSSEP
SVSNHVNHAPEIHRQKRDAPFSDLGPLKANERKDLNCAVKEYLLVAGYRLTAMTFYEEVT
DQNLDVWEKSPASVPDALRHYYYQYLSSTSEAAEEKISMIRENDSLKEANESLNHEKLCL
MKNKELAEGQINALTKSLEATQKDLKDKENLTQDLKQALENQRKELNDCRAEITSLKMHI
EGSSSLQNPVAANLDSTQSQAIESYKEEIKSLQMEIERLRAEKTNISDLVDSSCGDKESI
QTEEKVVEMDENRTQISHHIEPAEVVDSNTLVMPVQTFDNSTPKPEENLPESIMNPSNST
DGFPDGRNLSQQEEKPPSEDSRLHLNSENLGSEPVPENMGLATIQILADALPKIVPYVLI
NHREELLPLIMCAIERHPDSSTRDSLTHTLFNLIKRPDEQQRRIIMDACVNLAKNVGEMR
TETELLPQCWEQINHTYEERRLLVAQSCGELAEFVRPEIRDSLILSIVQQLIEDPATVVR
EAAAHNLALLLPLFPLMDKYFKVEELMFQLACDPSGVVVETTLKELLPAIINWGNKLDHI
LRVLLSHILGSAQRCPPLSGVEGSAESHLRVLGEQERWNLDVSLRMLAKLLPFIHQKAIE
TCPFSSVSDSNRTLLSSSILELYAGGHVEWPAFEWVHVDCFSGLLQLVCLLPQKEDNLRI
RMTKFLLAVSECFGDSYLIHIMLPVFLIAIGDDADLTFFPPNIHSRIKGLRPRTAVAERL
AILGVLPLLLAGVLGSPGKRQQLADYLRKLLLEGATKESRSTTHNMDIVNAVRFLCTFEE
HHGMIFNILWEMVVSSNIEMKISAANILKVIVPYIDAKVASTHVLPALITLGSDQNLNVK
YASIDAFGAVAQHFKNDMIVDKIRVQMDAFLEDGSLEATIAVVRSLVVAVPHTTERLRDY
LLSKIFQLTNTPVSSTDVMRRRQRANAFCEAIRALDATADLSANSIRDFLLPTIQNLLKD
PDALDPAHKEALEIILKERSGGTFEALSKVMGAHLGIASSVTSFFGEGGLLGKKEITESP
TEPVEALQSAASPAAAEDTRFMRIMRVTDMLRGKGKNPEETHQNQ
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atgatggatgtagaaagatcttcgctatgcaattgcgtggtgaattttttactggaagaa
aattacttgttaacggcatttgaattactccacgagcttctcgacgatggccgtgatgct
caagcgattcgtctcaaggagttcttctctgatccttctcattttcctcccgatcaaatc
tcccgttacaactctcttcgagttttagatcctcagagtttgctagaagagaaagaagca
attgaagaaaaactagcgctttgtgaatatgaactacgtttagctcaagaagacattgtg
aaactcaagactgagttacaaagaaaagaagatctcactcaggataaatcgagtgaacca
agtgtaagcaatcatgtaaatcatgcaccggaaatacatcggcaaaagcgagatgctccc
ttttctgatttaggcccattgaaagctaacgagcgtaaagatctaaattgtgcagtaaag
gaatatttgctagttgctggatatcgactaactgcaatgacattttatgaagaggttaca
gatcaaaacctagatgtttgggaaaagtcaccagcatctgtacctgatgcgttacgccat
tattattaccagtacctgtcttcaacttcagaagctgctgaggagaaaatttctatgatt
cgagaaaatgactcgctaaaagaggcaaatgagagtttaaatcatgagaaattgtgcttg
atgaaaaacaaagaattggctgaaggtcaaataaatgcattaacaaaatccttggaagcc
actcagaaggatctaaaggacaaggaaaatctgacacaagatctgaagcaagccttggaa
aaccaaaggaaggaactgaatgattgtagagctgaaatcacatctctgaaaatgcacatt
gaaggatctagttctttacaaaatccagtggctgctaatcttgactctactcagtcccag
gctatagaaagttacaaggaagaaataaagtctttgcagatggaaattgaaagattaagg
gctgaaaaaacaaatatttcggatttagttgattccagctgtggtgacaaagagtcaata
cagactgaagagaaagtcgtggagatggatgaaaatagaactcaaatatctcatcatatt
gaaccagcagaagttgtagacagcaacacgctggtaatgccagttcaaacattcgacaac
agcactcccaagcctgaagaaaatttgccagagtcaattatgaatccttctaacagtact
gatggtttcccagatggtagaaacctatctcaacaagaagagaaaccaccatcagaagat
agcaggttgcatttaaattctgaaaaccttggcagtgaacctgttcctgagaatatgggt
ttggcgactattcaaattcttgcagatgccttgcctaagattgtaccatatgttttgatc
aatcatcgggaggagcttcttccgctgataatgtgtgccatcgagaggcatccagatagc
agcactcgagattcattgacacacacactcttcaatttgattaaacgtccagatgagcag
caaaggcgaattataatggatgcatgtgttaaccttgctaaaaatgtgggggagatgaga
acagaaacagaattgcttccccagtgctgggaacaaataaatcatacatatgaggagcgt
agattgctggttgctcaatcatgtggagagcttgctgaatttgtccgacctgagattcgt
gattctcttattctatctattgtgcaacaactaatagaagatcctgcaacggttgttcga
gaagctgctgcacacaacctggccttgttgctcccactctttccgcttatggataaatat
ttcaaggttgaggagttgatgttccaattggcctgtgatccatctggagtggtggttgaa
acaacactaaaagaactacttcctgcaataataaattggggaaacaagttagaccatatt
ttgagagttctactctctcatatcttaggctctgctcagcgttgcccacctctttctggt
gttgaagggtctgcggagtcccaccttcgtgttttaggtgaacaagagcgttggaatctt
gatgtttcattaagaatgctggctaaattgcttccttttattcatcagaaagcaattgag
acttgcccattttcctctgtttcggactcaaatcggacattgttgtccagctccatactt
gaactgtatgcagggggacatgttgaatggcctgcatttgaatgggtgcatgtcgattgc
ttttctggtttgctacagctggtctgcttgttaccccagaaagaagataacttaagaatc
cgaatgacaaagtttttgttggctgtttctgaatgttttggggattcttatttgatacac
ataatgctgcctgtattcttgatagcaattggggatgatgcagatctgacgtttttccct
ccaaacattcattcaagaatcaaaggtttgagaccaagaacagctgtggcagagagactt
gctattctaggggtcctaccacttctcttggcgggtgttctaggatctcctggtaagcgt
caacaattagctgactacttgagaaagctgctactggaaggtgccacgaaggagagtcgg
tctacaacacacaacatggatattgttaatgctgtccgcttcctttgcacattcgaagaa
catcatggcatgatattcaatatcttgtgggaaatggttgtaagctccaatatagaaatg
aagatcagtgctgccaatatactcaaagtcattgtgccgtatattgatgcaaaagtggcg
tctacacatgttctccctgccctgattactcttggctctgaccaaaacctgaatgtgaag
tatgcaagcatagatgcatttggagctgtggcacaacattttaaaaatgatatgattgtt
gataaaatacgtgttcaaatggatgcttttcttgaagatggatcccttgaagcaactatt
gctgtggtccgttcattagtggtagctgttccacatacaacggagagacttagggattat
cttttgtccaagattttccaactgacaaacacacctgtttcttcaacggatgtgatgcgt
cgtcggcagagagctaatgcattttgtgaagctattcgtgctctggatgctacagcagat
ctttctgcaaatagcatccgtgatttcctcctccccaccatacagaacttattaaaagac
cccgatgcactagatccggcacacaaagaagcccttgaaataatattgaaagaacggtca
ggtgggacttttgaggctttaagtaaggtgatgggagcgcacctcgggattgcgtcgtca
gtgactagcttttttggtgaaggtgggctgctaggcaagaaagaaattacggaatcacca
actgaaccagttgaagctctgcaatctgcagcatcaccagcagcggcagaggataccaga
ttcatgcgaatcatgagggtcactgacatgcttagaggcaaaggaaagaacccagaagaa
actcaccagaaccagtga
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