Gossypium hirsutum (upland cotton): 107957946
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Entry
107957946 CDS
T04793
Name
(RefSeq) 26S proteasome regulatory subunit S10B homolog B
KO
K03064
26S proteasome regulatory subunit T4
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
107957946
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ghi03051
]
107957946
Proteasome [BR:
ghi03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
107957946
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_16
AAA_5
AAA_2
RuvB_N
AAA_22
PRS7_OB
nSTAND3
Prot_ATP_ID_OB_N
DUF815
AAA_18
AAA_7
TIP49
Parvo_NS1
AAA_14
RNA_helicase
AAA_33
Mg_chelatase
Sigma54_activat
AAA_28
AAA_3
IstB_IS21
AAA_24
TsaE
NACHT
bpMoxR
Sec8_N
ATPase
AAA_11
ATPase_2
AAA_25
ResIII
PhoH
AAA_30
AAA_19
Motif
Other DBs
NCBI-GeneID:
107957946
NCBI-ProteinID:
XP_016749066
UniProt:
A0A1U8PD04
LinkDB
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Position
A05:18836555..18839811
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AA seq
398 aa
AA seq
DB search
MSDGEDAVRRRNAIAEYRKKLLQHKEYESRVRAGRENLRAAKKEFNKTEDDLKSLQSVGQ
IIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREV
DPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP
PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEI
DAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRL
DRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAI
RAERDYVIHEDFMKAVRKLNEAKKLESSAHYSANFGKD
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacggagaagacgctgtacgacgccgtaatgctattgcggagtaccggaagaaa
ctgcttcaacacaaagagtatgaatcaagagttcgagcaggtagggagaatttgagagct
gcgaagaaggagtttaacaaaacagaagatgatttaaagtctcttcagagtgttggacag
atcattggagaagttctcaggcctcttgataatgaacgcttgattgttaaagcaagcagt
ggccctcgctatgtggttggttgccgcagcaaagttgataaggagaagctaacttcggga
actagagtagttcttgatatgacaacactgacaataatgcgggctcttccacgtgaggtt
gatccagttgtttacaacatgctgcatgaagatcctggtaatgttagctactcagctgtc
ggtggtttatctgatcaaattcgagagctaagggaatctattgagctccctctcatgaat
cctgagcttttccttagagttgggatcaaacctcccaagggtgtgctcctctatggacct
cctggtacaggcaagacattgctagctagagcaatagcaagtaatattgatgctaacttc
ttaaaggtcgtttcaagtgcaataattgacaaatacattggagaaagtgcaagattgata
cgagaaatgtttggatatgcacgtgatcaccaaccttgcatcatctttatggatgagatt
gatgccattggtggacgccgtttcagtgagggaacgagtgctgatcgtgaaatacagaga
acgttgatggagttacttaatcagcttgacggatttgatcagcttgggaaggttaaaatg
atcatggccacaaacagacctgatgttttagatcctgcacttcttcgtcctgggcggcta
gaccgaaagatagagattccattgccaaatgagcaatcaagaatggagatcctcaagatt
catgctgctggcattgccaagcatggtgaaatcgattatgaggctgttgttaaacttgct
gagggctttaatggtgctgatctacgaaatgtttgcacggaggctggaatgtcagcaatc
cgtgcagagcgtgattatgtcatccatgaagatttcatgaaggcagtaagaaaattgaac
gaagctaagaaactggaatcaagtgcacattacagtgccaattttgggaaagactag
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