Gossypium hirsutum (upland cotton): 107959885
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Entry
107959885 CDS
T04793
Name
(RefSeq) ABC transporter B family member 20 isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
107959885
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ghi02000
]
107959885
04147 Exosome [BR:
ghi04147
]
107959885
04090 CD molecules [BR:
ghi04090
]
107959885
Enzymes [BR:
ghi01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
107959885
Transporters [BR:
ghi02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
107959885
Exosome [BR:
ghi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
107959885
CD molecules [BR:
ghi04090
]
Proteins
107959885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_29
AAA_15
SMC_N
AAA_21
Zeta_toxin
HTH_psq
Motif
Other DBs
NCBI-GeneID:
107959885
NCBI-ProteinID:
XP_016751542
UniProt:
A0A1U8PK22
LinkDB
All DBs
Position
A05:complement(97352951..97361268)
Genome browser
AA seq
1407 aa
AA seq
DB search
MMVSRGLFGWSPPHIQPLTPVSEVSEPPESPSPYLDTTAEAAGEAAQVEAEEEMEEEEEI
EPPPAAVPFSGLFACADRLDWVLMIVGSLAAAAHGTALVVYLHYFAKIIQVLGLGPQEQG
QDRMDEQFERFKELSLTIVYIAAGVFAAGWIEVSCWILTGERQTAVIRSRYVQVLLNQDM
SFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFGGLIIGFVNCWQIALITL
ATGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYVRTLYAFTNETLAKYSYAT
SLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVTNHKAHGGEIIAALFAVI
LSGLGLNQAATNFYSFDQGRIAAFRLFEMISRSSSGLNQEGNILASIQGNIEFRNVYFSY
LSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNL
KLEWLRSQIGLVTQEPALLSLSIKDNIAYGRDATFDQIEEAAKIARAHTFISSLERGYET
QVGRAGLALTEEQKIKLSIARAVLLNPTVLLLDEVTGGLDFEAERTVQEALDLLMLGRST
IIIARQLCLIRNVDYIAVMEEGQLVEMGTHDELVALDGLYAELLRCEEAAKLPRRMPVRN
YKETSTFQIEKDSSSVHSFQESSSPKFVKSPSLQRVHGIFRPQDGAFNTQESPKAHSPPP
EKMLENGLPVDAGDKEPSIRRQDSFERRLPELPKLDVQSAQQQKSNDSDPESPVSPLLTS
DPKNERSHSQTFSRPLSYSDDIPIEVKEAKDVHHGEAPSFWRLAQLSFAEWLYAVLGSIG
AAIFGSFNPLLAYVIALIVTAYYRRQEHHHLQDEVDRWCLIIACMGIVTVVANFLQHFYF
GIMGEKMTERVRRMMFSAMLRNEIGWFDNEENSPDNLSMRLANDATFVRAAFSNRLSIFI
QDSAAVIVAILIGMLLHWRLALVAFATLPVLAVSAFAQKLWLAGFSKGIQEMHRKASLVL
EDAVRNIYTVVAFCAGNKVMDLYRLQLKKILKQSFFHGMAIGFAFGFSQFLLFACNALLL
WYTALSVKRRYIDLPTALKEYMVFSFATFALVEPFGLAPYILKRRKSLTSVFEIIDRVPK
IEPDENSALKPPNVYGSIELKNVDFCYPTRPEMLVLSNFSLKVNGGQTVAIVGVSRSGKS
TIISLIERFYDPVAGQILLDGRDLKLYNLRWLRNHLGLVQQEPIIFSTTIRENIIYARHN
ASESEMKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLL
DEASSSIESESSRVVQEALDTLIMGNKTTILIARRAAMMKHVDNIVVLNGGRIVEEGTHD
SLLAKNGLYVRLTQPHFGKGLRQHRLV
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
atgatggtatcaagaggtttatttgggtggtcaccaccccacatacaacctttgacacca
gtctcggaggtttcggagccgccggaatcgccgtctccgtacttggatacaacagcggaa
gctgctggtgaagcggcacaggtggaggcggaggaagagatggaagaggaagaagagatc
gaaccgccccctgccgctgtgcccttctctggattgtttgcctgtgctgacaggcttgat
tgggttctcatgatcgttggatcccttgctgctgcagctcatgggactgctcttgttgtt
tacttacattattttgcgaagatcattcaggttcttggacttgggccacaagaacaaggg
caagacagaatggatgagcagtttgagaggttcaaagagctttctttaactattgtttat
attgctgcgggtgttttcgctgctggctggatagaggtttcatgctggattctgacggga
gagcgacagactgctgttattaggtcaagatatgttcaagtattattgaaccaagatatg
agcttttttgatacttatggaaataatggagacatagtgagccaagtcttgagtgatgtg
ctgctcatccagtctgctcttagtgaaaaagttgggaattacattcataacatggctaca
tttttcggtggtctaattattggttttgtcaactgttggcaaattgcgctcataactctg
gctactggtccgtttattgttgctgctggaggcatatccaatatatttcttcacaggctt
gctgagaatattcaagatgcttatgctgaggcagctagcattgctgaacaggcagtctct
tatgtcaggaccttgtatgcatttacaaatgaaactttagccaaatattcttatgcaacc
tcattacaagccactttgagatatggtatattgattagtcttgtgcaagggcttgggctt
ggatttacatatgggcttgcgatatgttcttgtgccttacaactttgggttggaaggttc
cttgtcacaaatcacaaagctcatggtggcgaaatcatagcagctctttttgctgtaatt
ttaagtggccttgggctgaaccaagctgcaacaaatttctattcctttgaccaaggtcga
attgctgcttttagactttttgagatgattagccgttcatcctctggtttgaaccaggag
ggaaacatcctagcttccattcaaggaaatattgaatttaggaatgtgtattttagttat
ctatctcgacctgaaattcctatactgagtggcttttatctcactgtacctgctaaaaag
gctgtggcacttgttggtagaaatggctctgggaaaagcagtattatcccactcatggaa
cggttttatgatcctacattaggggaagttcttctagatggagagaatattaaaaaccta
aagctggagtggctgagaagccaaataggacttgttactcaggaacctgccttgcttagt
ttgagcataaaagataatattgcttatgggcgagatgctacatttgatcagattgaagaa
gctgcaaaaatagcaagggcacatacattcattagttcacttgagagagggtacgagaca
caggtggggagggctggcttagcattaacggaagaacagaaaatcaaactttctattgct
agagcggtgcttttgaacccaacagtccttctgcttgatgaagttactggtggacttgat
tttgaagctgaaagaactgttcaggaagctctagatctactcatgttgggacgttcaact
ataataatagctcggcagctttgtctcataagaaatgttgattatatagctgtgatggag
gagggtcagctggttgaaatgggtacacatgatgagttagtagcccttgatgggttgtat
gctgagctcctcagatgtgaggaggctgcaaaacttccaaggaggatgccagttaggaat
tacaaggagacgtcaacattccaaattgaaaaggattcttcatcagttcacagcttccaa
gaatcttcatctccaaagtttgtcaaatcaccttctctccaaagagttcatggtatattt
cggccccaagatggtgcttttaacacacaagaatcacctaaagctcatagtccaccacca
gagaagatgctggaaaatggcttaccagtggatgctggtgataaggaaccatcaattagg
aggcaggatagttttgaaaggagacttccggagttgcctaaacttgatgttcagtctgct
cagcagcagaaatcaaatgattcggacccagaatctcctgtatcaccccttctgacatct
gatcctaaaaatgaacgttcgcattctcagacttttagtcggcctctcagttactctgat
gatatcccaattgaagttaaggaagcaaaggatgtgcatcatggggaagctccgtcattt
tggaggttggcacagcttagttttgcggagtggctctatgctgtcttgggaagcattggt
gcagcaatctttggctctttcaatccacttcttgcatatgttattgcactgattgtaacg
gcatattataggcgtcaggaacatcatcatttacaagatgaagtagacaggtggtgtttg
ataattgcctgtatgggtatagtgactgttgttgccaacttcttgcaacacttctacttt
ggaattatgggggagaaaatgactgaacgggtgcgcagaatgatgttctcagcaatgctg
cggaatgaaattggatggtttgataatgaagagaatagccctgataacttgtccatgcga
ttggcaaatgatgctacatttgtaagggctgcttttagcaatcggctttcaatatttata
caggatagtgctgctgttattgttgctatactaattgggatgttgctacattggcggttg
gcacttgtggcatttgcaacccttccagtcttagctgtctctgcttttgcacagaaatta
tggctcgctggattttcaaagggaatccaggagatgcataggaaggcatcattggtcctc
gaggatgcagtgaggaacatatacactgttgtagcattttgtgctggtaataaggtaatg
gacctctacaggctacagttgaagaaaatattgaaacagagtttctttcatggaatggca
atagggtttgcatttggcttttcacagtttcttctttttgcctgcaatgctctgctcctt
tggtacactgcactctctgttaaaagacgctatatagatctgcctacagccctcaaggag
tacatggttttctcttttgcaacttttgcactggtggagccatttggattggcaccatac
atacttaaaaggcggaaatctctcacttcagtttttgaaattattgaccgagtccctaaa
attgagccagatgaaaactcagcattgaagccaccgaacgtctacggaagcattgagctg
aaaaatgttgatttctgctatcccactcgtccggaaatgttggtattgagcaatttcagt
cttaaagttaatgggggacaaactgtagccattgttggagtttcaagatctgggaagagt
accataatatctctaatagagaggttttatgatccagttgcaggtcagattctacttgat
ggacgggatttgaagctctacaatttgaggtggttgaggaaccacttaggtcttgttcaa
caggagccaattattttctcaactacaatccgggaaaacattatatatgcaaggcacaac
gctagcgaatctgagatgaaagaggctgcaagaatagctaatgctcaccattttatcagc
agcttacctcatggttatgatacacatgtgggtatgaggggtgtggatttgaccccagga
cagaaacaaagaattgctattgctcgagtggtgctgaagaatgctcccatcttattattg
gatgaagctagctcgtccatcgaatctgagtcaagccgagtggtgcaggaggcacttgac
acattgataatgggaaacaaaacaaccattttgatagcccgtagagctgcaatgatgaag
catgttgacaacattgtagtacttaacggtggtcgaattgttgaggaagggacacatgat
tctttgttagcaaaaaatggcttgtatgttcgtttaacgcaacctcatttcgggaaaggt
ttgcgtcagcatcggctggtttag
DBGET
integrated database retrieval system