Gossypium hirsutum (upland cotton): 107960395
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Entry
107960395 CDS
T04793
Name
(RefSeq) probable GMP synthase [glutamine-hydrolyzing]
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
107960395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ghi03400
]
107960395
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
107960395
DNA repair and recombination proteins [BR:
ghi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
107960395
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
Decorin_bind
DUF3137
Dmrt1
FAM104
Motif
Other DBs
NCBI-GeneID:
107960395
NCBI-ProteinID:
XP_040969791
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Position
A05:19436526..19439591
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AA seq
335 aa
AA seq
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MSVATRPRSSAKPLTEPRAILGPAGNRVRVSDESKRRTEALKKPQRPKVPVSQSPKSVVQ
SNVSVDSCCSSDSSSSNSSFKTASSRKTVKQNGVKQAKPKVASTADEVVTEISPAMSGPL
KRCDWITPFSDPLYTSFHDEEWGVAVHNDRKLFELLVFSQALAELSWPTILKKREIFRKL
FDNFDPSSMAQFTEKKMLSLKVDGCLLLSEAKLRAIVENAKLILKVQQEFGSFSSYCWGS
VNHKPLRNAFRYARQVPVKTPKAEVMSKDMMRRGFCCVGPTVVYSFMQVAGIVNDHLVTC
FRYQECNATVKKDIKPKIEEIERLTKDADNICLSR
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtagccacgaggcccaggtcgtcggcgaaaccgctaacggaaccgcgagcgatt
ctcggtccggccgggaacagagttagggtttcggacgagtcgaagagaagaaccgaagct
ctaaaaaagccacaaagaccgaaagttccggtctctcagagcccaaagtccgttgtacaa
agcaatgtctccgtcgacagttgctgttcctctgactcttcatcgagcaattcctccttc
aaaacggcaagctctaggaaaaccgttaagcaaaacggggtgaagcaagccaaacccaag
gttgcttcgacggctgacgaggttgtcactgaaatttctccggcaatgtcgggaccgtta
aaacgatgtgattggatcacgccgttttctgaccctttgtatacttctttccatgatgaa
gagtggggtgttgcggttcataatgacaggaagctgtttgagctactagtcttttcgcaa
gctttagctgaactcagctggccaacgattctcaaaaagagggagatattcaggaagctt
tttgacaattttgatccatcatcaatggcacagtttaccgaaaagaagatgttatcattg
aaagttgatggttgtctattgctttctgaagcgaagcttcgtgcaatcgtggagaatgct
aaacttattcttaaggttcagcaggaatttggctctttcagcagctattgctggggatct
gtaaaccacaagccgttaagaaatgcattccgttatgcgcgtcaagtaccggttaagacc
ccaaaagctgaagtcatgagcaaggacatgatgcggagaggcttctgctgcgtgggacct
actgttgtttattcgttcatgcaagtggccggtattgttaatgatcatcttgtaacttgc
ttcagataccaagaatgcaatgcaaccgtcaaaaaggacataaaaccaaagattgaggaa
atagagagactaactaaagatgcagataacatttgcttatctcgctag
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