Gossypium hirsutum (upland cotton): 107960807
Help
Entry
107960807 CDS
T04793
Name
(RefSeq) RING-box protein 1-like
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03420
Nucleotide excision repair
ghi04120
Ubiquitin mediated proteolysis
ghi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107960807
04120 Ubiquitin mediated proteolysis
107960807
09124 Replication and repair
03420 Nucleotide excision repair
107960807
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107960807
03400 DNA repair and recombination proteins [BR:
ghi03400
]
107960807
Enzymes [BR:
ghi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
107960807
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
107960807
Multi subunit Ring-finger type E3
SCF complex
Ring finger protein
107960807
Cul2 complex
107960807
Cul3 complex
107960807
Cul4 complex
107960807
Cul7 complex
107960807
Cul8 complex
107960807
Cul9 complex
107960807
DNA repair and recombination proteins [BR:
ghi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
107960807
TCR (transcription coupled repair) factors
Cul4-CSA complex
107960807
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
RH_dom
Motif
Other DBs
NCBI-GeneID:
107960807
NCBI-ProteinID:
XP_016752573
UniProt:
A0A1U8PQE5
LinkDB
All DBs
Position
A05:3527352..3532765
Genome browser
AA seq
140 aa
AA seq
DB search
MAVHQPMCIRRPGICEFCERERISSRPICSVPAMSTQTSGSTAPSSSTEDPKHFDMKKWS
SVALWSWDIVVDNCAVCRNHIMDLCIECQTNQIVGADNECTVAWGACNHAFHFHCISRWL
QNRSVCPLDNAEWEFRKYGR
NT seq
423 nt
NT seq
+upstream
nt +downstream
nt
atggctgttcaccagccaatgtgtatcagaaggccaggtatatgtgagttttgtgagaga
gaaagaatttcttcccgccctatttgttcggtcccagccatgtctacccaaacttccggc
agcaccgccccttcctcctccactgaggaccccaagcacttcgatatgaaaaagtggagt
tcggttgccctctggtcctgggatattgtcgtggataattgtgcggtttgcaggaatcac
atcatggatctctgtatcgaatgccaaaccaaccaaatagtcggtgccgataatgaatgc
actgttgcgtggggtgcatgcaaccatgcattccactttcactgcattagtcgatggctg
cagaaccggtcagtatgtcctttggataatgctgaatgggagttccgaaagtatggtcgc
tag
DBGET
integrated database retrieval system