KEGG   Gossypium hirsutum (upland cotton): 107960807
Entry
107960807         CDS       T04793                                 
Name
(RefSeq) RING-box protein 1-like
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03420  Nucleotide excision repair
ghi04120  Ubiquitin mediated proteolysis
ghi04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    107960807
   04120 Ubiquitin mediated proteolysis
    107960807
  09124 Replication and repair
   03420 Nucleotide excision repair
    107960807
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ghi04121]
    107960807
   03400 DNA repair and recombination proteins [BR:ghi03400]
    107960807
Enzymes [BR:ghi01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     107960807
Ubiquitin system [BR:ghi04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   107960807
  Multi subunit Ring-finger type E3
   SCF complex
    Ring finger protein
     107960807
   Cul2 complex
     107960807
   Cul3 complex
     107960807
   Cul4 complex
     107960807
   Cul7 complex
     107960807
   Cul8 complex
     107960807
   Cul9 complex
     107960807
DNA repair and recombination proteins [BR:ghi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      107960807
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      107960807
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4_2 zf-RING_11 zf-C3HC4 RH_dom
Other DBs
NCBI-GeneID: 107960807
NCBI-ProteinID: XP_016752573
UniProt: A0A1U8PQE5
LinkDB
Position
A05:3527352..3532765
AA seq 140 aa
MAVHQPMCIRRPGICEFCERERISSRPICSVPAMSTQTSGSTAPSSSTEDPKHFDMKKWS
SVALWSWDIVVDNCAVCRNHIMDLCIECQTNQIVGADNECTVAWGACNHAFHFHCISRWL
QNRSVCPLDNAEWEFRKYGR
NT seq 423 nt   +upstreamnt  +downstreamnt
atggctgttcaccagccaatgtgtatcagaaggccaggtatatgtgagttttgtgagaga
gaaagaatttcttcccgccctatttgttcggtcccagccatgtctacccaaacttccggc
agcaccgccccttcctcctccactgaggaccccaagcacttcgatatgaaaaagtggagt
tcggttgccctctggtcctgggatattgtcgtggataattgtgcggtttgcaggaatcac
atcatggatctctgtatcgaatgccaaaccaaccaaatagtcggtgccgataatgaatgc
actgttgcgtggggtgcatgcaaccatgcattccactttcactgcattagtcgatggctg
cagaaccggtcagtatgtcctttggataatgctgaatgggagttccgaaagtatggtcgc
tag

DBGET integrated database retrieval system