Gossypium hirsutum (upland cotton): 121203689
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Entry
121203689 CDS
T04793
Name
(RefSeq) YTH domain-containing protein ECT4-like isoform X1
KO
K20102
YTH domain-containing family protein
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
121203689
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121203689
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
Endonuc-BglII
Motif
Other DBs
NCBI-GeneID:
121203689
NCBI-ProteinID:
XP_040930063
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Position
A01:complement(2852614..2856653)
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AA seq
654 aa
AA seq
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MYQEGAPEFVIDQGSMYYPTAANIGYYFTGFESPVEWDEHQNIFSADGADVQFTGAKTEA
LPYVYYTPSYGYAQSPYNPYNPYISSAVMGDSPFVGAQQYYTFPPYSNPVTPTAYFPVVI
QPDGIPNNSTEFLLDTRASIASRPDGRGVRHNLASASAAFSRNSSKSAPNQTDSLTRVSD
GQSKHSANRGNFTDSSSPAAARTQQGRVASGSIQSIGNIPGGKLPSHHNQLKMDLPAGNT
FSDYGSSAPGRGALDKLRPNISVGRVLNDTHGYPDTLGEQNRGPRTNRLKNQFMVKAYTT
KAGNSDAEGNIVIYTDQYNKDDFPIDYVDAKFFVIKSYSEDDVHKSMKYNVWSSTPHGNK
KLDSAFEDAQRIAAGKPRGCPIFLFFSVNASGQFCGVAEMIGSVDFQKDMDFWQQDKWSG
SFPVKWHIIKDVPNSHFRHIIVENNENKPVTNSRDTQEIMFKQGVEMMKVFKNHTMKTSL
LDDFMYYENRQPIMQEEKARLLIRSFQSPVQASTLDTASKLKFELHLNDNEKATKQSDLD
MLKRTVPSSSQQVSFGSDIINARNMNDNVDQISVVANNDASTLKIGLLTINSKQDESKPS
VDADAVETVTVGSMPVKVNGFTESSGYLTFGTLPHNPKTLQPEGGTAKKGSNRG
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgtaccaggaaggagcccctgagtttgtcattgatcagggatcaatgtactaccctact
gctgccaacattggatactattttactggttttgaatcacccgttgaatgggacgaacac
cagaacatttttagtgcagatggtgcagatgtccaatttacaggtgccaaaactgaagct
ttgccttatgtatattacacacctagctatggatatgcacagtctccatacaacccatac
aatccttacatatctagtgctgtgatgggtgatagcccatttgttggggcacaacaatat
tacacctttcccccttattcaaaccctgtaacaccaaccgcttattttcctgttgtcatt
caaccagatggaattccaaacaattctacagaatttttgcttgatactcgtgcatcaatc
gctagtagacctgatggaaggggagttagacataaccttgcttcagcatctgcagccttt
tctaggaactcttcaaagtctgctccaaatcagacagattccttgactagggtatcggat
ggacaaagtaaacattctgcaaaccgtgggaattttactgatagttccagtccagctgca
gcacgcactcaacagggtagagttgcttctgggtccattcagtcaattggcaacattcct
ggtgggaaacttccatctcaccataatcaattaaaaatggatcttcctgctggtaatacc
ttttctgactacggatcaagtgctcctggacgcggtgcactggataagcttcgaccaaat
atctctgttggaagggttttgaatgatacgcatggttacccagatacattgggagaacag
aatcgaggccccagaaccaacagattgaaaaatcaattcatggttaaagcctacacaact
aaagcaggaaattctgatgccgaagggaacatcgttatctataccgaccaatataacaag
gatgattttccaattgactatgttgatgcgaagttctttgtaataaaatcatatagcgag
gatgatgtacacaagagcatgaaatacaatgtttggtcatccacaccccatggcaacaag
aagctggatagtgcttttgaagatgcacagagaatagctgcagggaaacctaggggctgt
ccaatcttccttttcttttctgttaatgccagtggacaattctgcggtgttgcggagatg
attggctcggttgacttccaaaaggatatggatttttggcagcaagataagtggagcgga
agcttccctgtcaagtggcacattattaaagatgttccaaatagccactttagacacatc
atagtagagaataatgaaaacaagcctgtgactaatagcagggatacgcaagagataatg
ttcaagcaaggtgtggagatgatgaaggtattcaaaaatcatacgatgaagacttcttta
cttgatgactttatgtactatgaaaatcgtcagccaatcatgcaagaagagaaggccagg
ctactaattagaagctttcagagcccagtccaagcatcgacattggatactgcctctaag
ctaaagtttgagctacatctgaatgacaatgagaaagctaccaagcaaagcgatcttgac
atgctgaagagaactgttccttcttctagtcaacaggtttcttttggttctgatataatt
aatgcaagaaacatgaatgataacgtagatcaaatctcagttgtggccaacaatgatgct
tctactttaaagattggcttgctcactataaattcaaagcaggacgagtctaaaccctct
gtagatgctgatgctgttgagacggtaacagtaggatctatgccagtgaaagtcaatgga
tttactgaatcatctggttacctaacatttggtactcttcctcataatcccaagacctta
cagcccgaaggaggtactgctaaaaagggtagtaatcgtggttag
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