Gossypium hirsutum (upland cotton): 121229252
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Entry
121229252 CDS
T04793
Name
(RefSeq) probable GMP synthase [glutamine-hydrolyzing]
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
121229252
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ghi03400
]
121229252
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
121229252
DNA repair and recombination proteins [BR:
ghi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
121229252
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
Motif
Other DBs
NCBI-GeneID:
121229252
NCBI-ProteinID:
XP_040968914
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All DBs
Position
A05:complement(5508397..5512057)
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AA seq
379 aa
AA seq
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MSGAPRLRSMNVTDSEARPVLGPAGNKAGSLSARKPASKSSKKVEKSSVEVTVVEEKKAL
PSSTVNSLSPKTHSLSVPSVLRRHERLLHSSLSLNASCSSDASTDSFQSRASTGRLNRCD
SLGSRRKPYASKPKSVVSDDSLDLSSNSSHPKKRCAWVTPSTDPSYAAFHDEEWGVPVHD
DRKLFELLVLSGSLSELTWSAILSKRHIFREVFIDFDPVAVSKLNEKKLIAHGSVASSLL
SELKLRVIVENARQISKVIDEFGSFDQYIWSFVNHKPIVSRFRYPRQVPVKTPKADVISK
DLVRRGFRSVGPTVIYSFMQVAGITNDHLTSCFRFQECITAAEAKEENVTKDPTEKKETV
NVINTESSVAIDELSFSSE
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtgctccaagattgaggtcgatgaatgtgaccgattctgaggcaaggcctgta
ctaggacctgccggaaacaaagctggttcgttgagtgctagaaaaccagcttcaaagtct
tcgaagaaggttgaaaagtcttccgttgaggtgactgtagtagaggagaaaaaagcactt
ccatcatcaactgttaattctctttctccaaaaactcattctctgagtgttccttcagtg
ctacgccgccatgagcgcctattacattctagtttatcgctaaatgcctcatgttcatcg
gatgcttccacagattcatttcaaagtcgagcatcaactggtaggttaaatcgttgcgat
agtttaggaagtaggaggaagccatatgcatcaaagccgaaaagtgttgtttctgatgac
agtttggatttgtcatctaatagttcacatcctaagaagagatgcgcatgggtgacacca
agtacagatccaagttatgctgctttccatgatgaagagtggggagttcctgtacatgat
gacaggaaactgtttgagctgcttgtactatcgggttcgttatctgaacttacatggtct
gctatcctaagcaaaaggcacatatttagagaagtttttatagattttgatcctgttgct
gtatcaaaattgaatgagaagaagttaatagcacatggtagcgtggcaagttctttgtta
tcagaactaaagctgcgagttattgtcgagaatgcacgccaaatatctaaggttatagat
gagtttggttcgttcgaccagtatatttggagttttgtgaaccacaagcctatagttagc
agattcagataccctcgtcaggttccagttaagaccccaaaagcagatgtcataagcaaa
gatctcgtaagaagaggtttccgaagcgtggggccgacagtcatctactctttcatgcaa
gtggcgggaataacaaacgaccatctcacaagttgtttcagattccaggagtgtataact
gcagcagaagcaaaagaagaaaatgtaaccaaagatccgactgaaaagaaagaaactgtt
aatgtgatcaacacagaatcgtccgtagctatcgatgaattgagtttctcctccgaatga
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