Grimontia hollisae: AL542_17195
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Entry
AL542_17195 CDS
T04260
Name
(GenBank) ATP-dependent helicase
KO
K19789
DNA repair protein RadD
Organism
gho
Grimontia hollisae
Brite
KEGG Orthology (KO) [BR:
gho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gho03400
]
AL542_17195
DNA repair and recombination proteins [BR:
gho03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
AL542_17195
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
SLFN-g3_helicase
zf-tcix
DZR
ERCC3_RAD25_C
AAA_22
AAA_30
AAA
zinc_ribbon_2
Motif
Other DBs
NCBI-ProteinID:
AMG31907
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Position
1:2952984..2954759
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AA seq
591 aa
AA seq
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MYTLRPYQADAVKAVVHYFRHHSTPAVAVLPTGAGKSLVIAELAKLARGRVLVLAHVKEL
VEQNHEKYEGYGLKGGIFSAGLGRKESKDKVVFASVQSVVRNLDAFKDQFSLLVIDECHR
VPDNEDSSYRKVIAHLQSMNSGLKVLGLTATPYRLGMGWIYQYHTAGRVRSETPRFFRDC
IFELPIRFLLDEGFLTEARILDAPVLSYDFSSLKASSTGFYKEADLDRVIENAPRATPQI
IQQVLEYAKARHGVMIFAATVKHAQEIMTLLPDGESALVIGDTAQDERDSIIQRFKNRQI
KYLVNVSVLTTGFDAPHVDLIAILRPTESVSLYQQIAGRGLRLSPGKKDCLILDYAGNVY
DLYQPEIGDPKPDSDSEIVTVPCPACGFNNNFWGKLDNNGFLIEHYGRRCQGFFENDDGE
REICGYRFRAKFCSECGADNDIAARRCHQCDHALVDPDKKLRDALKLKDAMIMACTDMRL
TAGKNKFDKPQLKVTYIGQDGAEIHEIWPLSTKRQKEEFLAKFVNPHLVDRHRPFTDTAP
SKVVRAEHRLRFPDFVVARKNGRFWAIRDKIFDLNQFASQQEIRTMLSNVA
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgtataccctccgcccctatcaggctgacgctgtcaaagctgttgttcattatttccgc
caccattccacgccagcggtcgctgtactgccgaccggtgctggtaaaagcctggtgatt
gcagagctggcaaagctcgcccgtggccgtgttttggtgctggcccatgtcaaagagctg
gtcgagcagaaccatgaaaagtatgagggttacggactgaagggtggcattttctctgcc
ggtcttggcaggaaagagagcaaagacaaagtggtatttgcatccgtccaatctgtggtc
agaaaccttgatgcgtttaaagaccagttttcccttctggttatcgacgaatgccaccgc
gtaccggacaacgaagacagcagttaccgcaaagtcattgcacacctgcaaagtatgaat
tcggggctcaaagtacttggcctgactgccaccccttaccgtcttggcatgggatggata
taccaatatcacaccgcaggccgggtacgcagcgaaaccccaagattcttccgtgactgc
atctttgagttacccattcgtttcttgctggatgaaggctttctgactgaggcccggatt
ttagacgccccggtgctgagctatgatttttcgtcgctgaaagcctcttcgacggggttt
tataaagaagcggatctggacagggtaattgaaaatgcgccgcgtgccacgccgcagatc
atccaacaggtgctggagtatgcgaaagcgcgacacggcgtgatgatcttcgctgcaacg
gtcaaacacgcccaggaaatcatgacgctcttgccagacggagaatctgcactggtcatt
ggcgataccgcgcaagatgagcgcgatagcattatccagcgcttcaaaaaccgccaaatt
aaatatctggtcaatgtctcggtactcaccacaggctttgacgccccccatgtcgattta
attgcgatactgcgcccgacagaatctgtcagcctgtaccaacaaattgccggacgcggc
cttcgcctttcaccgggtaaaaaggattgtttgatcctcgattacgccggtaacgtctac
gatctgtatcagccggaaataggcgatcctaaacctgacagcgacagtgaaattgtcacc
gtgccctgcccggcttgcggttttaacaataatttctggggcaagttggataacaacggc
tttctgattgagcattacggccgccgctgccagggattttttgagaatgacgacggtgaa
cgggaaatctgtggctaccgtttccgtgccaaattttgcagtgaatgcggagcagacaat
gacattgctgcacgccgttgccaccaatgtgaccatgccctggtggatccggacaaaaag
ctgcgtgatgccctgaaacttaaagacgcaatgatcatggcctgcaccgacatgcgccta
acggcagggaaaaacaagttcgacaagccacagcttaaagtgacctatatcgggcaagat
ggcgctgagatccacgaaatctggccactttctaccaagcggcaaaaagaagaatttttg
gcaaagtttgtcaatccccacttggtagacagacaccgtccatttactgacaccgcacca
tctaaagtggtgcgtgcagagcacaggctgaggtttccagattttgtcgttgcccgcaaa
aatggcaggttctgggcaatcagggataagatttttgatttaaaccagtttgcttcccag
caagagattcgaaccatgctgtcaaacgtagcctaa
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